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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lja5g2935
ATGTCAAGGTCTCAGTTTTATCTTTACTATTTCCTTTCTAACTTCTCTTACAAAGGAAAATGGACGGGCTTTGGGAAAACAAGGGATGATGAGTATCAAAACAAACATGGAAGTGGTAATTTTGAAGGTCCATTTGGTGATTATCAAGATGCAGGTGATGACCAACAACAAAATAAGAAGAAGAAATACCACAGACATACTCGTCAACAAACTAAGGAGCTTGAAGCTTTGTTCAATGAGACTCCTCATCCCGACGAGAAGCAAAGATTAGATATCAGTAAGAAGCTAGGCTTGGAGAAAGATAATGTCAAGTTTTGGTTTCAGAACAAGAGAACCCAAATGAAGGAGCAATTGGAACGCCGTGAGAACAAACATCTTAGGCAAGAAAATGAGAAGCTTCGAGTAGAGAACTATGTTATGCATAAAGCTGTGGAAAATCCAACATGCAACAAATATGATGGTATAATCATTTATAAGGGGAACCAACTGATACTTGAGAATTCTAAACTAAATGATCAATTGAATCAAATGCATGTTGGTGGGTCAAGCAATTTTAGCATGCCCTTGTTGCCAATGGGACATGATCTAAGAAATGAAGTTCTGGGCACTCCACTCAATACGCTTTCTGAAATCACACCACCAACGGAATTGGTGAGTAATGAAGCTGAGCTTAAGAGATCTATGTTGTTGAATCTTGCATTAATACCCCTTTGGATCAACAGTTCAGATGGAGGGAAAGAAGTATCAAACCATGACGAGTATGCAAGGACTTTTTCTCCTTATATTGGTCCAAACCCCAATTGTTATGTAACTGAAGCTTCGAGAGAAACCAGGCTAGTACTTTTCAACAGTTTGTCCCTTGTGGAGACATTGATGGACGCAGATCGCTGGTCAGGAATGTTTCCATCTATGGTTGGTAAAGTTGTAATCGTTGAAGTGATATCAAGTGGCATGAATGGATCTATAAGCGGAGCTTTGATAATGATGCAATGTGAGGTTCAATTACCTTCCCCACTTGTCCTAGCTAGGGAATGGAATATCCTGAGGTTTTGCAAGCAACATGCAGAAGGTGTATGGGTTGTTGTTGATGTATCTATTGATAATGAAAGTTCATCAATGAGTTACAAAAGGCTTCCTTCTGGATGTATTGTTCATGACATAACAAATAGTTTGTCCAAGGCAAGATTTCATCACCGCAAAATTATTGCATGCAGATCACATGGGTTGATCATTCCCAATATGATGAGTGTTGTCCACCAACTGTATCACCCTTTAGTTAATTCGGGCATTGGGTTTGGTGCTCAAAGATGGGTTGCAACTCTCCAAAGGCAATGTGAATTCATTGCAATGTTTATGTCCTCTTGTGTTCCATCTGCAGACACCCCGGACATAAGCCAAGGTGGTAGGAGAAGCATGCTGAAGCTCGCACAACGTATGGCCAACTACTTTTTGTCTAGAATTTGTGCTTCATCTTCTTGCAAGTGGGACATCCTTCACATGAGTAACAATGACACAAGGTTTATGTCTCGGAAACATGTTAACAATCTTGGTGAAGATCCTCACAATGTCATCAGCGTCACAACTTCTGTTTCGATGCCAGTGTCGCGGAAAATTTTGTTTGATTTCCTACGCAATCGATATAGAGGTCAATGGAACATTATTTCGAATGATATACCAAAGCAGGAGATTCTTCATTTGAGCAAAGGACAAAAAGAAGGAAATTTGGTTTCCATAATCGGGAATTATAATAATGTTGGTAATGAAAATATTATGAGCAACTTGCTTTGGGTGCAAGACTCTTGGACTGACACCTCTGGGTCTATGATAGTGTATTCCCCCATTACTGTTCAATCTTTCAACATGGTGGTGAATGGTGAAGATTCTGTAGATGTTCATCTCTTGCCTTCAGGCTTTGTTATTCTTCCAGATGGTGCTAGGACTTTACCTGATGGTAGCAACAATAGTAGAGGTGACAGTAACAACGATCGTGGCAAATGCCTGCTTACATTAGGCTTTCACAATGGAGTTAGTTGA
2034
0.3987
MSRSQFYLYYFLSNFSYKGKWTGFGKTRDDEYQNKHGSGNFEGPFGDYQDAGDDQQQNKKKKYHRHTRQQTKELEALFNETPHPDEKQRLDISKKLGLEKDNVKFWFQNKRTQMKEQLERRENKHLRQENEKLRVENYVMHKAVENPTCNKYDGIIIYKGNQLILENSKLNDQLNQMHVGGSSNFSMPLLPMGHDLRNEVLGTPLNTLSEITPPTELVSNEAELKRSMLLNLALIPLWINSSDGGKEVSNHDEYARTFSPYIGPNPNCYVTEASRETRLVLFNSLSLVETLMDADRWSGMFPSMVGKVVIVEVISSGMNGSISGALIMMQCEVQLPSPLVLAREWNILRFCKQHAEGVWVVVDVSIDNESSSMSYKRLPSGCIVHDITNSLSKARFHHRKIIACRSHGLIIPNMMSVVHQLYHPLVNSGIGFGAQRWVATLQRQCEFIAMFMSSCVPSADTPDISQGGRRSMLKLAQRMANYFLSRICASSSCKWDILHMSNNDTRFMSRKHVNNLGEDPHNVISVTTSVSMPVSRKILFDFLRNRYRGQWNIISNDIPKQEILHLSKGQKEGNLVSIIGNYNNVGNENIMSNLLWVQDSWTDTSGSMIVYSPITVQSFNMVVNGEDSVDVHLLPSGFVILPDGARTLPDGSNNSRGDSNNDRGKCLLTLGFHNGVS*
678
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lja5g2935
677
SUPERFAMILY
Bet v1-like
468
645
-
-
Lja5g2935
677
SMART
START_1
215
447
IPR002913
GO:0008289
Lja5g2935
677
Gene3D
-
28
111
-
-
Lja5g2935
677
PANTHER
HOMEOBOX LEUCINE ZIPPER PROTEIN
186
673
-
-
Lja5g2935
677
PANTHER
HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1
25
178
IPR042160
-
Lja5g2935
677
SUPERFAMILY
Bet v1-like
241
446
-
-
Lja5g2935
677
Pfam
START domain
224
446
IPR002913
GO:0008289
Lja5g2935
677
Coils
Coil
111
136
-
-
Lja5g2935
677
ProSitePatterns
'Homeobox' domain signature.
92
115
IPR017970
GO:0000981|GO:0006355
Lja5g2935
677
CDD
homeodomain
60
115
IPR001356
GO:0003677
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lja5g2935
Lja-Chr5
57756141
57759449
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lja5g2935
27
673
Homeobox Transcription Factor Family
AT3G61150
42.090
1.16e-169
504
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-HD-ZIP
Lja5g2935
START
1.5e-25
CL0209
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lja5g2935
K09338
-
gmx:100794400
627.861
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