Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2921 ATGCTTGAGGTTCTGAGCAGCAAGTGCAGAAAGCTTGAGTCCCAACTTGAAGAGATCAACAAGAACGAACAGAAGGGTATCAGTTCATATCAAATTGAGTCTCTGTCTAACCATGTTTCTAGCAAGAGAGCAAGGCTAGAATTTCCCACAGTCAAAAAGCCATTGGAAATCTTCTTCAGAACCCTCCCCAATGATGACACTTTGTTAATTAAAGATGGATATCAGTGGAGGAAGTATGGGCAGAAGGTTACCAAAGACAATGGTTCTCCTCGAGCTTACTTTAGGTGCTCCATGGCTCCCACTTGCCCAGCCAAAAAGAAGGTGCAAAGATGCACACATGATAGGTCTATCCTTGCTGCAACTTATGATGGAGAGCACAACCATAGTGCCCTTGATGACTCATTCAGACCATCTTCATCCACACCAAAAGGCTCATCAATAGCTAATAATTTATCTCCAACAATTATACCATATGATAAAGAAGCTATGAACAATGTCTTTGCTATTTCTGATTGGGCTCAAACAAATGCTAGACTCTATGAGGATGTCATTCCACAGCATGTCCATGGCAGCAACATCAAAATTGAAGATTATATAAGTTCTGTGATCAAAGATCCTGATTTCACTACTGCATTAGCGGAAGCAGTTGCCCACATTATCACAGGTCAACATAAGCGACAAAGTCTAAATCTCAATTTGGATATTCCAAAAGAGTGA 717 0.4086 MLEVLSSKCRKLESQLEEINKNEQKGISSYQIESLSNHVSSKRARLEFPTVKKPLEIFFRTLPNDDTLLIKDGYQWRKYGQKVTKDNGSPRAYFRCSMAPTCPAKKKVQRCTHDRSILAATYDGEHNHSALDDSFRPSSSTPKGSSIANNLSPTIIPYDKEAMNNVFAISDWAQTNARLYEDVIPQHVHGSNIKIEDYISSVIKDPDFTTALAEAVAHIITGQHKRQSLNLNLDIPKE* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2921 238 ProSiteProfiles WRKY domain profile. 65 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g2921 238 PANTHER WRKY TRANSCRIPTION FACTOR 49 1 220 - -
Lja5g2921 238 Gene3D WRKY domain 57 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja5g2921 238 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 220 IPR044810 GO:0003700
Lja5g2921 238 SMART WRKY_cls 70 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g2921 238 Coils Coil 2 22 - -
Lja5g2921 238 SUPERFAMILY WRKY DNA-binding domain 67 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja5g2921 238 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2921 Lja-Chr5 57482139 57492604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2921 42 224 WRKY Transcription Factor Family AT1G80840 39.594 3.99e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja5g2921 WRKY 1.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2921 - - gmx:100170679 307.76