Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2911 ATGGCAGGTTCTTCTACAACTAGAGCCTCAGCTTGTTCTCTTTTGCTTTTATTCCTTCTCTTTGGCTTCTCTGCTGCTATGGATATCTTGGTTGGAGGCAAGATAGATGCATGGAAGGTCCCATCTTCTGAATCAGACTCACTCAACAAATGGGCACAAAGGGCCAGGTTCCAAATTGGGGACCATCTCGTCTGGAAATATGATGGTGGGAAAGATTCAGTTTTGGAAGTGAGCAAGGAAGATTATGAAAAGTGCAACATCTCAAGCCCCATCAAGGAATACAATGATGGGAACACAAAGGTGAAGCTTGATCATCCTGGTCCATTCTACTTCATCAGTGGAGCAAAGGGTCACTGTGAAAAAGGTCAGAAGCTGGTTGTGGTGGTTTTGAGTCCAAGGGGAGGAAGAAACACTGGTACCAATGTTTCACCTGCACCTGCAAGTGCACCTGTTCCAACAGGGTTTGAAGGTCCAGCTGTAGCTCCAAGTCCAGTCAGCAGTGCCACTGCTTTGCAGGGTGGTCTTGTGATGTTGATGGGAGTACTTGCCATGTGGGTTTTCTGA 564 0.4681 MAGSSTTRASACSLLLLFLLFGFSAAMDILVGGKIDAWKVPSSESDSLNKWAQRARFQIGDHLVWKYDGGKDSVLEVSKEDYEKCNISSPIKEYNDGNTKVKLDHPGPFYFISGAKGHCEKGQKLVVVVLSPRGGRNTGTNVSPAPASAPVPTGFEGPAVAPSPVSSATALQGGLVMLMGVLAMWVF* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2911 187 CDD OsENODL1_like 28 130 IPR041846 -
Lja5g2911 187 PANTHER BLUE COPPER PROTEIN 9 183 IPR039391 GO:0009055
Lja5g2911 187 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Lja5g2911 187 Pfam Plastocyanin-like domain 38 123 IPR003245 GO:0009055
Lja5g2911 187 Gene3D - 25 133 IPR008972 -
Lja5g2911 187 PANTHER EARLY NODULIN-LIKE PROTEIN 3 9 183 - -
Lja5g2911 187 ProSiteProfiles Phytocyanin domain profile. 27 131 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2911 Lja-Chr5 57358179 57359457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2911 9 187 Phytocyanin Superfamily AT4G31840 51.351 5.24e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2911 - - gmx:100527857 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2911 5 57358179 57359457 Lja5g2911 5 57358179 57359457 ECH