Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2892 ATGGCTGGTTATGGTAGTGGTATTTTTGCAGAGATCATAGATGATGGTGATGATGGAGTCTTTAAATACTACGCAGATGGCCAGTGGAATAAATCCTCATCTGGAAAATCTGTTCCTATCATCAATCCCACCACCAGAAAGACCCACTTCAAGGTCCAAGCTTGTACCCAGGAAGAGGTTAACAGGGTCATAGAATCAGCAAAAACAGCTCAAAAATCATGGGCCAAGACTCCACTGTGGAAAAGAGCAGAGTTGCTTCACAAAGCTGCAGCATTGCTGAAGGAGCACAAAGCCCCCATTGCAGAGTGCCTTGTTAAGGAGATTGCAAAGCCAGCTAAGGATGCAGTCACTGAAGTTGTCAGATCAGGGGATTTGGTGTCCTACTGTGCTGAGGAAGGTGTGAGGATTCTTGGGGAAGGAAAATTTCTGGTCTCTGATAGTTTTCCAGGCAATGAAAGAACCAAATACTGTCTCACTTCCAAGATTCCACTAGGAGTTATTTTAGCTATTCCACCCTTTAACTATCCTGTTAATCTGGCTGTTTCAAAGATTGGTCCGGCGCTTATTGCTGGAAACTCCATTGTGCTTAAACCTCCAACCCAGGGTGCTGTTGCTGCACTACATATGGTGCATTGCTTTCATTTGGCTGGCTTCCCAAAAGGTCTTATTAGCTGTGTGACAGGAAAAGGATCTGAGATTGGTGACTTTCTTACTATGCATCCAGGGGTGAACTGCATAAGTTTCACAGGTGGCGACACTGGAATAGCAATATCAAAGAAATCTGGAATGATTCCTCTTCAAATGGAGCTGGGTGGAAAAGATGCTTGCATTATTCTTGAAGATGCTGACTTGGATTTGGCAGCTGCTAACATTGCAAAAGGAGGTTTCTCCTACAGTGGTCAGAGATGCACGGCTGTGAAGGTTGCCTTGGTCATGGAATCAGTTGCTGACACTCTTGTTAAAAAAATCAATGACAAAGTTGCAAAGTTAACTGTTGGGCCTCCTGAGGATGACTGCGATATCACCCCAGTTGTAACAGAATCCTCTGCTAACTTTATAGAAGGGTTGGTAATGGATGCTAAGAAGAAAGGAGCAACATTCTGCCAGGAATACAAAAGAGAGGGAAATCTCATATGGCCAGTTCTGTTGGATAACGTTCGTCCTGACATGAGGATAGCATGGGAGGAGCCGTTCGGACCGGTTTTGCCTGTTATCAGAATCAATTATGTTGAAGAAGGAATCCACCATTGTAATGCTAGCAATTTTGGCCTTCAGGGATGTGTCTTCACAAGAGACATAAACAAAGCAATGCTGATAAGCGATGCGATGGAGACAGGAACAGTTCAAATTAATTCAGCACCAGCTCGTGGACCTGATCACTTTCCTTTTCAGGGTCTGAAGGATAGTGGTATTGGTTCTCAAGGAATCACCAACAGTATTAACATGATGACAAAGGTTAAGACCACAGTAATCAACCTACCAGCCCCTTCTTACACTATGGGATGA 1506 0.4402 MAGYGSGIFAEIIDDGDDGVFKYYADGQWNKSSSGKSVPIINPTTRKTHFKVQACTQEEVNRVIESAKTAQKSWAKTPLWKRAELLHKAAALLKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIGPALIAGNSIVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKSGMIPLQMELGGKDACIILEDADLDLAAANIAKGGFSYSGQRCTAVKVALVMESVADTLVKKINDKVAKLTVGPPEDDCDITPVVTESSANFIEGLVMDAKKKGATFCQEYKREGNLIWPVLLDNVRPDMRIAWEEPFGPVLPVIRINYVEEGIHHCNASNFGLQGCVFTRDINKAMLISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKTTVINLPAPSYTMG* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2892 501 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 5 501 - -
Lja5g2892 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 488 IPR016162 GO:0016491
Lja5g2892 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Lja5g2892 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 462 IPR016163 GO:0016620
Lja5g2892 501 CDD ALDH_F11_NP-GAPDH 20 492 - -
Lja5g2892 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Lja5g2892 501 PANTHER ALDEHYDE DEHYDROGENASE 5 501 - -
Lja5g2892 501 SUPERFAMILY ALDH-like 21 492 IPR016161 GO:0016491
Lja5g2892 501 Pfam Aldehyde dehydrogenase family 29 488 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2892 Lja-Chr5 56828183 56835949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2892 5 501 Aldehyde Dehydrogenase Gene Family AT2G24270 86.720 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2892 K00131 - gmx:100789108 924.85