Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2852 ATGTCTAGAGAAGTCATTGCTACTCCATCAGCTCCTTCATTTGATTATGAGATCTTGGATAGAGATCCTGACATCCTTAGAACTGTTAGTGCCTCATCCAATCGCACTAATCCATGGATTGAACCTGAAAGGTTGAAACTGAGACATAGAATTGGTCGGGGGCCCTTTGGTGATGTTTGGCTTGCAACCCATCATCAGTCAACTGAAGATTATGATGAGCACCATGAAGTTGCTGCTAAGATGTTCCATCCAATCAGAGAAGATCATGTGAAGATTGTATTGGAGAAATTCAACGAGTTATACTTTAAATGCCAAGGAGTTTCTAACGTTTGCTGGCTGCATGGGATTTCAATCATAAATGGAAGGATCTGCATCATTATGAATTTGTATGGGGGTTCAATTGGTGATAAGATGGCTAGACTCAGAGAAGGCTTTATTTCTTTGCATGATGTTTTGAGGTATGGAATCAATCTAGCTGAAGGTATTGTGGAACTTCACTCTAAAGGGATCCTTATTCTCAACCTGAAACCATTCAATGCTCTTCTCAATGATAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCTAGTGTTTTGCTTGGCTCCTCATTTCTTAACTCAGATATGGCTCAGAGGCTTGGAACTCCAAATTACATGGCTCCAGAACAATGGGAACCGGAGATCAGAGGCCCGATATCCTTTGAAACGGATACATGGGGGTTCGGATGTACCATTGTTGAGATGTTGACCGGTAATCAACCTTGGTTTGGATGTCCTGTTAGTGGAATATACCAATCGGTTGTTGAAAAGTATGAAAAACCCCATATTCCGAGTGGCCTTCCTTCTTCGGTTGAGAATATCCTTAGTGGATGCTTTGAGTATGATTTGAGAAATCGCCCTCTGATGGTTGATATTTTGAGCGTCTTTAAAAGCTCACTGAATGAACTGTCCAATGATGGAGGATGGAGATATCAGGGAATCATGAAAGTTATTCCCAAATCAGTTAGCACGGGCTACACAAAGTGGGTCCCCTCAAAGGATCATCTTCAGGTGGGCGACATGGTCCGATCTAGAAAGCCTTCCAATTCATGCAAAGCTCAAAACATGGAAATCTCGGAAGGAACTGTTGTTGGTTTAGAACGCAATGCGGATCATGGTTTTGTTCTCGTGAGGGTCCACGGTATTCACGACCCTGTGAGAATTCACGCGTCGACTCTCGAACGCGTCTCATTTGGCTTGGCAGCCGGTGACTGGGTGCGCTTAAGAGATGAGAACGAGAAACACTCACCGGTGGGCATTTTGCATTCCATCAATCGCGAAGATGGTAGAGTCACTGTTGGATTCATCGGGCTGCAAACCCTTTGGAATGGAAATTCCTCAGAATTAGAAATGGCAGAATCATTCTGTGTGGGCCAGTTTGTCAAGCTGAAAGACACTGTTTCGAGTCCTCGGTTTGAATGGCGTCGCAAAAGGGGAGGCGGTGCGTGGGCTACTGGTAGGGTTTCATGGATCCTCCCTAATGGGTGTTTGATTGTCAAGTTCCCAGGGATGCTGAATCTTGGGAATGAATCTAGCACATTCTTGGCTGATCCATTCGAGGTTGAAGTGGTTAATTTTAAGACTTGTCCCGGGATGATAGAAAAGTATCAACATGTGGAGGATCATCACTGGGCAGTTAGACCTGTTCTTATTGTGTTTGGCCTCTTCACAGCTCTCAAACTAGGCACATTGGTTGGAAAGAAAGTGAGGAGGAACGCGAAGGTCAATGCAATAGAAAGCGAAAATGAATATGTTGAAGGTCAAAATGGCAGCAATGCTTCAAGGAGATCCTCTAGTACTATAGCTCCTGGCACAACATGGGTTCCTTCAGTTGCTAACATGAGTAACATCCTTTTTAAAGGTGGTATATAA 1911 0.4375 MSREVIATPSAPSFDYEILDRDPDILRTVSASSNRTNPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEHHEVAAKMFHPIREDHVKIVLEKFNELYFKCQGVSNVCWLHGISIINGRICIIMNLYGGSIGDKMARLREGFISLHDVLRYGINLAEGIVELHSKGILILNLKPFNALLNDNDQAILGDVGIPSVLLGSSFLNSDMAQRLGTPNYMAPEQWEPEIRGPISFETDTWGFGCTIVEMLTGNQPWFGCPVSGIYQSVVEKYEKPHIPSGLPSSVENILSGCFEYDLRNRPLMVDILSVFKSSLNELSNDGGWRYQGIMKVIPKSVSTGYTKWVPSKDHLQVGDMVRSRKPSNSCKAQNMEISEGTVVGLERNADHGFVLVRVHGIHDPVRIHASTLERVSFGLAAGDWVRLRDENEKHSPVGILHSINREDGRVTVGFIGLQTLWNGNSSELEMAESFCVGQFVKLKDTVSSPRFEWRRKRGGGAWATGRVSWILPNGCLIVKFPGMLNLGNESSTFLADPFEVEVVNFKTCPGMIEKYQHVEDHHWAVRPVLIVFGLFTALKLGTLVGKKVRRNAKVNAIESENEYVEGQNGSNASRRSSSTIAPGTTWVPSVANMSNILFKGGI* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2852 636 SUPERFAMILY Protein kinase-like (PK-like) 42 309 IPR011009 -
Lja5g2852 636 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Lja5g2852 636 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2852 636 PANTHER OS06G0639500 PROTEIN 1 633 - -
Lja5g2852 636 PANTHER OS06G0639500 PROTEIN 1 633 - -
Lja5g2852 636 Gene3D Phosphorylase Kinase; domain 1 19 130 - -
Lja5g2852 636 Gene3D Transferase(Phosphotransferase) domain 1 132 333 - -
Lja5g2852 636 CDD STKc_PknB_like 46 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2852 Lja-Chr5 56096970 56101901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2852 29 317 MAP Kinase Kinase Kinase AT2G17700 25.510 1.33e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lja5g2852 PK_Tyr_Ser-Thr 1.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2852 - - gsj:114393396 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2852 5 56096970 56101901 Lja5g2852 5 56096970 56101901 ECH