Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2851 ATGGCTTCACCCAACATCATCGTTCCGACCAAAGAGGAAAGGAACCGGATAATACTTGGTGATATTGGAAACGGAAGAACCCTAAGAGAAGTTGATATCAACACCAATTTCTGTCACCAACCACTTGCCACTCAAAAGAAACCGAATGAGCAAATTGTTGACAATATTGATGCTGCTGATGTTCACAATGAGCTTGCTGCTGTGGAATATATTCAAGACATATACAAGTTCTATAAGACGGTTGAGAATGAGAGCCGTCCCGATGCCACCTACATGGACTCACAACCTGAGATAACTCAGACAATGAGAGCTATGCTTGTTGATTGGGTGATTGAAGTTCATGTTCACATGACCAGGTTTCATTTTTCAATTGAAACCCTCTACCTCACCATTAACATAGTTGATCGTTTCCTATCACTCGTGACTGTGCCAAAGAGGAAATTGCAATTGGTTGGCATCACTGCCATGCTCATGGCATCCAAGTATGAAAACAACTCCCTGGCCCCTGAGGACTTGAGTGTGCCTACACCATTTGTTTTCCTAGTTCGCTTTATCAAGGCCTCCTCAATTCGAGATCCGGACGAGGCAGTAGAAAACATGGCACATTTTCTTTGTGAGCTGGGAATGATGCATTATGCTACCTTGCAGCACTGTCCATCAATGATTGCTGCCTCAGCAGTGTTTGCAGCTAGATGCACTCTCAACAAGAGCCCTTCTTGGAATCACACACTTGAGATGCACACTGGTTACTCACAACAAGAACTTATGGATTGTGCTACACTCTTGGTGAGCTTCCATTGCAGGGCTAGGAATGGAAAGCATAAGGCTGCGTTGTACACCAAGTACTCTGATCCTAAGAGAGGAGCTGTTGTAATGCTTCCACCAGCTCAAAATCTAGTTCCTCTTGAGTTTGATGATGTTGGATATTATTATTAA 936 0.4359 MASPNIIVPTKEERNRIILGDIGNGRTLREVDINTNFCHQPLATQKKPNEQIVDNIDAADVHNELAAVEYIQDIYKFYKTVENESRPDATYMDSQPEITQTMRAMLVDWVIEVHVHMTRFHFSIETLYLTINIVDRFLSLVTVPKRKLQLVGITAMLMASKYENNSLAPEDLSVPTPFVFLVRFIKASSIRDPDEAVENMAHFLCELGMMHYATLQHCPSMIAASAVFAARCTLNKSPSWNHTLEMHTGYSQQELMDCATLLVSFHCRARNGKHKAALYTKYSDPKRGAVVMLPPAQNLVPLEFDDVGYYY* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2851 311 CDD CYCLIN 173 263 IPR013763 -
Lja5g2851 311 Gene3D - 171 302 - -
Lja5g2851 311 Gene3D - 73 86 - -
Lja5g2851 311 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 172 303 - -
Lja5g2851 311 SUPERFAMILY Cyclin-like 62 166 IPR036915 -
Lja5g2851 311 PANTHER CYCLINS 44 170 IPR039361 -
Lja5g2851 311 Pfam Cyclin, N-terminal domain 73 167 IPR006671 -
Lja5g2851 311 PANTHER CYCLINS 172 303 IPR039361 -
Lja5g2851 311 SUPERFAMILY Cyclin-like 174 297 IPR036915 -
Lja5g2851 311 SMART Cyclin_C_2 175 296 IPR004367 -
Lja5g2851 311 Gene3D - 87 165 - -
Lja5g2851 311 Pfam Cyclin, C-terminal domain 175 294 IPR004367 -
Lja5g2851 311 CDD CYCLIN 102 172 IPR013763 -
Lja5g2851 311 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 44 170 - -
Lja5g2851 311 SMART cyclin_7 108 178 IPR013763 -
Lja5g2851 311 SMART cyclin_7 179 264 IPR013763 -
Lja5g2851 311 PIRSF Cyclin_A_B_D_E 171 306 IPR039361 -
Lja5g2851 311 PIRSF Cyclin_A_B_D_E 11 170 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2851 Lja-Chr5 56083247 56084641 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2851 45 300 Core Cell Cycle Gene Families AT4G37490 48.288 1.19e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2851 K21777 - gmx:547919 324.324