Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2840 ATGTCCTTGATAGCAGAAGCACCAGATTTTCTCCAAGTCTATTCTGATGGTTTGGTGAAACGCTTTGACCCTGAAACTGTCCCTGCATCTTCCAAACCCTCCAATGGATACAAATCCAAGGATGTTGTTATTGACCCATCAAAACCCATCACCGGAAGAATCTTCCTTCCTCATTTTGAGAATCAGCAGAACCTCCTCCCGGTCTTGGTTTATTTCCATGGTGGCGGTTTTTGCATTGGCTCCACCACATGGCTCGGCTACCATCACTTTCTCGGTGACTTCTCGGTCGCGTCCCAATCCATTGTTCTCTCCGTCGACTACCGTTTAGCCCCGGAGCATCGTCTCCCGGCGGCTTATGAAGATTGCTATGTTGCACTTCAATGGCTTGCGGAACAAGCAAGCTCTGAGCCTTGGCTTCAGGGTGCTGATATTTCAAGGGTGTTTCTCTCTGGGGAGAGTGCTGGGGGTAACATTGCACACCATGTGTTTGTGAAAACGACTCAGAGAAATAATGATGTGCTTGTCTTGAAAATCAAAGGGTTGATGGTTATACACCCTTACTTTGGGAGTGAGGAGCGGACTGAGAAAGAGGAGGCTGTGGCTGATGATGACAAAGAATGTGTCGCTATGAATGACATGTTCTGGAGGCTGAGTATACCGGAAGACTCGAACCGCGACTATTTTGGGTGTAATTTTGAGAAACATGATGTGGATGCGAGTGTGTGGTCTCAGTTTCCGGGGATAGAGGTTTATGTTGCTGGTAGAGATTTTCTGAAAGAAAGGGGTGTCATGTATGCAGAGTTTTTGAAGAAGAAAGGGGTGAAAGAGGTGAAGCTTGTGGAGGCTAAGGAAGAACCACACATATTTCATATATTTTATCCTCAATCTGATGCAACTCGCTTGCTCCAGAGCCAGATGAGTCATTTCATGAAGAGATACTAA 942 0.4628 MSLIAEAPDFLQVYSDGLVKRFDPETVPASSKPSNGYKSKDVVIDPSKPITGRIFLPHFENQQNLLPVLVYFHGGGFCIGSTTWLGYHHFLGDFSVASQSIVLSVDYRLAPEHRLPAAYEDCYVALQWLAEQASSEPWLQGADISRVFLSGESAGGNIAHHVFVKTTQRNNDVLVLKIKGLMVIHPYFGSEERTEKEEAVADDDKECVAMNDMFWRLSIPEDSNRDYFGCNFEKHDVDASVWSQFPGIEVYVAGRDFLKERGVMYAEFLKKKGVKEVKLVEAKEEPHIFHIFYPQSDATRLLQSQMSHFMKRY* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2840 313 SUPERFAMILY alpha/beta-Hydrolases 15 311 IPR029058 -
Lja5g2840 313 Pfam alpha/beta hydrolase fold 69 290 IPR013094 GO:0016787
Lja5g2840 313 PANTHER CARBOXYLESTERASE 13-RELATED 5 310 - -
Lja5g2840 313 PANTHER ARYLACETAMIDE DEACETYLASE 5 310 - -
Lja5g2840 313 Gene3D alpha/beta hydrolase 11 311 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2840 Lja-Chr5 55932508 55933536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2840 3 292 Carbohydrate Esterase AT5G16080 36.093 1.84e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2840 - - gmx:106796748 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2840 5 55932508 55933536 Lja5g2840 5 55932508 55933536 ECH