Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2778 ATGGCTGGTTCTGGTGATAGTAGAGTTGAGAATTTGATTTGTGCTAGGAAGTCGTTGAAACTTAGCCTTGAGAAATCAAAGGCTGTGGGGTTAGCTTTAGAGAAAGCTGGGCCGAGATTCGATGAGATTAAGCTTAGGCTGCCTTCGCTGGGATCTGCGGTTAGGCCAATTCGGGCGGAGAAGGATGCCCTTGTGGCTGTTGGCGGTCACATTAATCGGGCAGTTGGCCCTGCGGCTGCCGTGCTGAAGGTTTTCGATGCGGTTCACGGGCTTGAAAAGTCGCTTTTGTCGGACCCGCGGAATGATCTTCCGGGCTACTTGTCGGTGTTGAAGCGACTGGAGGAGGCGTTGAGGTTCTTGGGTGATAATTGTGGGTTGGCTATTCAGTGGTTGGATGATATAGTTGAGTACTTGGAGGATAACAACATTGCGGATCAAGTGTTTCTCTCGAATTTGAAGAAGGAGTTGGAGGGACTCCGGGGTTCAGGGAATGGGGAGCTGGATGGTGGCCTCTTAGCTGCCGCGTTGGATAAGTTGGAGAATGAGTTCCGGCTTCTCTTGACTGAAAACAGCGTGCCTCTTCAAATGTCTGCCCTTGGTGATCAAGCCTGCATTGCCCCTTCGCCTTTGCCTGTGCCTGTTATTCACAAGTTGCAGGTGATTCTTGGAAGAATGAAGGCTAATGACAGACTTGACAAGTGCATATCAATTTATGTCGAAGTCCGTGGTTCTAATGTGAGAGCAAGTTTGCAGGCTCTCAATTTGGATTACCTTGAGATCTCAGTGTCTGAATTCAATGATGTGCAGAGCATAGAGGGTTATATAGCTCAGTGGGGAAAGCATTTGGAGTTTGCCGTGAAACATTTGTTTGAGGCTGAGTATAAGCTTTGTAATGATGTGTTTGAGAGGCTTGGTTTGGATGTATGGATGGGTTGCTTTTCAAGGATAGCTGCACAGGGTGGTATGCTTGCATTTCTTCAATTTGGGAAGACTGTTACAGAGAGCAAGAAAGACCCCATTAAACTTTTGAAGCTGTTGGATATTTTTTCATCCTTGACTAAATTGAGGCTGGATTTCAACCGTCTTTTCGGGGGCGCAGCGTGTGTTGAAATCCAGAATTTGACAAGGGATCTTATCAAGAGTGTAATTGATGGGGCAGCAGAGATTTTCTGGGAACTTCTGGTTCAGGTGGAGTTACAGAGGCAGAACCCACCCCCTCTAGATGGGAATGTCCCAAGATTGGTGAGCTTTATCGCTGATTACTGCAATAAACTCCTAGGGGAGGACTATAAGCCGATTCTGACCCAAGTTCTGATTATTCAGAGAAGTTGGGAGCGTCAAAGCTTTCAGGAGAGACTCCTTGTTAATGAGGTTTTGAATATAATCAAAGCTGTTGAATTGAATTTGGAGACATGGATTAAGGGTTATGAGGATCCTATGCTTTCCAATTTTTTCGCTATGAACAATCACTGGCATCTGTACAAGCATTTGAAAGGGACAAAGCTCGGGGATCTCTTGGGGGATTCTTGGCTAAGGGAGCATGAACAGTATAAGGACTATTACTCCACAATATTCTTGCGGGACAGCTGGGGCAAGCTTCCTGGACATTTGAGTAGGGAGGGGCTGATTCTTTTTTCAGGAGGACGCGCCACTGCTCGTGATCTGGTCAAGAAAAGATTGAAAAAGTTCAATGAAGCTTTTGATGAGATGCACACCAAGCAGTCAGGTTGGATCATCCCTGAACGAGATCTCAGAGAGAAGACGTGTCAGCTTATAGTGCAGACTGTGGTGCCTGTTTACCGGAGCTTCATGCAGAACTATGGTCCCTTGGTTGAGCAAGATGCAAAATATGTGAAATACTCAGTGCAGAAGCTGGAGGAAATGCTTTTGCTTCTTTACCGACCAAAGCCTGTAAGACATGGCAGCTTGAGAAGCCCGCAGTCTAATGGAAAATATGGTAATGGAATATCAAATCTTCGCCGGACAGCTTCTGCAGTTGAGTAA 2004 0.4626 MAGSGDSRVENLICARKSLKLSLEKSKAVGLALEKAGPRFDEIKLRLPSLGSAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRNDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNNIADQVFLSNLKKELEGLRGSGNGELDGGLLAAALDKLENEFRLLLTENSVPLQMSALGDQACIAPSPLPVPVIHKLQVILGRMKANDRLDKCISIYVEVRGSNVRASLQALNLDYLEISVSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERLGLDVWMGCFSRIAAQGGMLAFLQFGKTVTESKKDPIKLLKLLDIFSSLTKLRLDFNRLFGGAACVEIQNLTRDLIKSVIDGAAEIFWELLVQVELQRQNPPPLDGNVPRLVSFIADYCNKLLGEDYKPILTQVLIIQRSWERQSFQERLLVNEVLNIIKAVELNLETWIKGYEDPMLSNFFAMNNHWHLYKHLKGTKLGDLLGDSWLREHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEAFDEMHTKQSGWIIPERDLREKTCQLIVQTVVPVYRSFMQNYGPLVEQDAKYVKYSVQKLEEMLLLLYRPKPVRHGSLRSPQSNGKYGNGISNLRRTASAVE* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2778 667 MobiDBLite consensus disorder prediction 642 667 - -
Lja5g2778 667 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 656 IPR004140 GO:0000145|GO:0006887
Lja5g2778 667 Gene3D Exocyst complex component Exo70 79 640 - -
Lja5g2778 667 Pfam Exo70 exocyst complex subunit 277 629 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lja5g2778 667 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 8 656 - -
Lja5g2778 667 SUPERFAMILY Cullin repeat-like 81 633 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2778 Lja-Chr5 55005977 55009077 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2778 6 666 EXO70 exocyst subunit family AT4G31540 73.638 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2778 K07195 - gmx:100796139 1127.08