Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2777 ATGGCAGTGGAACTCATGGGGTTCCCAAAACTGGATGAGCAAAAGGCCATTCAGGAGGCCGCATCAGAAGGCCTCAGGGGCATGGAACACCTGACCCGAACCCTCTCCCATCAACCCACCCACTTAAACACTCACCTCACCGACCTCACCGTTTCCAAGTTCAAGAAACTCATCTCCCTCCTCGACCGGACCGGCCACGCCCGGTTCAGACGAGCCCCGGTCCACCCACCACCGGTTCACCACATCGCACCTTCTTCTACCTCCTCCTCTCTTCCTTCACTGCAACCGCTAACCCCGCCCGCTCACTTCGCCGCTCCGGCGCCGGTCTCCATCCGCCATGCGCCGGCGAGCTTCGTTCCGGCGCAATCGCAAAGCTTGACGCTTGATTTCACGAAGCCCAACGAGGCCGTCCTGAGCAGCTCCTCCAACGCCAAGTCCGTCGAGCTCGAATTCTCGAAGGAAACCACGGCAGCCTTCAGCGTCTGCTCCACCTCCTCGTTTTTGTCCTCCGCTATCGCCGGCGACGGCAGCGTCTCTAACGGCAAGCAAGGCTCCTCGATCTTCCTTGCGTCGGCCACGCCTCAACCGGCTTCCTCCGGCGGGAAGCCGCCGCTGTCGTCGGCGCCGTTCAAGAAAAGATGCCATGAACACCGTGAACACTCCGGTGACGTTTCTGGCAACAGCAAATGCCACTGCACCAAGAAACGGAAAAACCGGGTGAAGAAGACCGTGAGAGTACCGGCGATTAGTTCAAAAACCGCCGATATACCGCCAGACGAGTACTCGTGGCGAAAGTACGGTCAGAAACCGATCAAGGGTTCACCGTATCCACGGGGTTATTATAAGTGCAGCACGGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAACGTGCTACAGATGATCCAACGATGCTGATTGTGACGTACGAGGGGGAGCACAGGCACGCGCTTCAGGCCGCGATGCACGAGGACGCTTCTGGGGTTGTGGGTTTGGTTTTTTAG 1002 0.5888 MAVELMGFPKLDEQKAIQEAASEGLRGMEHLTRTLSHQPTHLNTHLTDLTVSKFKKLISLLDRTGHARFRRAPVHPPPVHHIAPSSTSSSLPSLQPLTPPAHFAAPAPVSIRHAPASFVPAQSQSLTLDFTKPNEAVLSSSSNAKSVELEFSKETTAAFSVCSTSSFLSSAIAGDGSVSNGKQGSSIFLASATPQPASSGGKPPLSSAPFKKRCHEHREHSGDVSGNSKCHCTKKRKNRVKKTVRVPAISSKTADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLIVTYEGEHRHALQAAMHEDASGVVGLVF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2777 333 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 321 IPR044810 GO:0003700
Lja5g2777 333 MobiDBLite consensus disorder prediction 209 225 - -
Lja5g2777 333 MobiDBLite consensus disorder prediction 73 93 - -
Lja5g2777 333 Gene3D WRKY domain 243 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja5g2777 333 ProSiteProfiles WRKY domain profile. 252 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g2777 333 MobiDBLite consensus disorder prediction 191 231 - -
Lja5g2777 333 Pfam WRKY DNA -binding domain 259 315 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g2777 333 PANTHER WRKY PROTEIN 12 321 - -
Lja5g2777 333 SUPERFAMILY WRKY DNA-binding domain 253 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja5g2777 333 Pfam Plant zinc cluster domain 211 255 IPR018872 -
Lja5g2777 333 SMART WRKY_cls 257 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2777 Lja-Chr5 54985737 54988450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2777 1 333 WRKY Transcription Factor Family AT2G24570 57.726 9.04e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja5g2777 WRKY 7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2777 - - cam:101509842 466.463