Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2759 ATGGCGGCAGTTGGGGGTGAAGCTTTTCTCTCTGCTTTTATTGGAGTTGTTATGGACAGGCTGGCTTCTCCTGAGTTTGCCAACTTCATCCGAGGGAAGAAGTTTGACGATAATTTGCTCCAACGGCTGAAGAACACTTTTTATGCTGTTGAAGCAGTGATGAACGATGCTGAGCAGAAACAGATCAAGGACCCTGCAGTGAAGAAGTGGCTCGATGACCTCAAAGATGCTGTCTATGTTGCTGATGACTTTCTGGATCATGTTTCTACTAAAGCTGCAACTCGAAAGGAGGAGGTAAGCAACTTCTTCTCTCGCTACTTCAATTTTCAAGACAGGGACATGGTTAATAAGTTGGAAGACATAGTTGGAAGACTGGAATCTATTTTCAAACTCAAAGATACTCTTGGTCTTAAAGAGGTTGCTAGGGAGAACTATTCATGGAGACTCCCATCTACCTCTCTTGATGATGGGTTTAATATCTATGGCAGGGATCAAGACAAAAAGGTCATCCTCAAATTATTGTTAGATGGTAATATGAGTGATGGTAAAGTAGGTGTAATACCTATTGTTGGTATGGGTGGGGTGGGAAAAACAACTTTAGCCCAACTCGTCTATAATGATGAAAAATTAAAGCAGGAATTTGATTTACGAGCATGGGTTTGTGTTTCTGATAAGTGTGATATTCTCAAGGTTACTAAGACTATCATAGAGGCAATTACCAAAAGTAATTGTGGTTTGAACGATCTAAATTTACTCCATCTTGAATTGAAGGAAAAGTTGGTGGGGAGGAAATTCTTAATAGTTTTGGATGATGTTTGGATGGAGGATTATGTTGAATGGAATTCTCTTATAAAACCTCTTCAATTCGGAACTAAGGGAAGCAAAATTCTCGTGACGACCCGCATTGAAAAAGTTGCTTCTCTAATCCAAACTTTCCAAAGTTATCATCTAAAACAATTGTTGGATGAAGATTGTTGGTTAGTCTTTGCGAACCATGCATGTTTTTCATCAGCATCTAATGGGAACACAACTCTTGAAAAAATTGGCAGAAAAATTGTTAGAAAGTGTGATGGATCACCTTTAGCAGCACAATCACTCGGAGGCTTATTGCGAGGCAAGCATGATATCAAAGACTGGAATAATATATTAAGTTGTAACATTTGGGAACTTTCTGAAAATGAGAGCAAGATTATTCCGGCACTGAGAATTAGTTATCATTATCTACCTCCGTGTTTGAAACGTTGCTTTGTTTATTGTGCGTTGTATCCTAAGGATTATATGTTTGAAAAAGATGAATTAATCTTGTTGTGGATGGCAGAAGATCTTTTACAGCCTTCAAAAAGTGGAAAGACTTTAGAAGAAGTCGGTTGTGAGTATTTTGATGATTTGGTTTCAAGATCATTTTTTCAACGTCTTGGCACTTCAAAGCGTTATTTTGTGATGCATGATCTTGTCCATGATTTAGCGATCCTACTCGGTGGAGAATTCTACTTTAGATCCGAAGAACTTGGGAAAGAAATTAAGATTTGTGTGAAGACTCGTCATTTGTCATTAAGTGGGTTAAGTGATGAAGTCTATGAAAATTCTGATTTTTTTGGTAGAGTTAAATTTTTAAGGACACTCTTACCAATTCATATTAAAGAATCTCCATTCAACAGTGAAAAGGCAGCATGCATCATTATGTCCCGTTTGAAGTACTTAAGAGTCCTGTCATTTGGAAGATTTGTGGAACCATTACCAAATTCAATAGGTGAATTGATTCATTTGAGATATTTGGACCTCTCTTACACATTAATAAAGACATTACCGGAGTCATTGTGTAACTTATACAATCTACAAACTTTGAAATTGGGCGGGTGTTCATTGCTGACTATGTTACCTGATGGCATGTACAATCTTGTAAATTTGCGTCATCTTGATATTTGGGGAACTCAAATAAAAGAGATGCCCAAAGGAATGAGTGGATTAAAAAATTTGCAGCATTTAAGTAAGTTTATTGTGGGCAAGCACGAAGGGCAGAAGATCAAAGAACTGGGAAAGCTTTCAAATTTACATGGATCACTTAACATTTGCAATTTGCAGAATGTTGCCAATGGTAATGAAGCGTTGGAGGCAAAGTTAACAGATAAGAAAAACCTTGATAGGTTACGCTTGTATTGGTCTCTTAAGAGCCATTTTACAGACTCCCTAGCTGAAATGGACATTCTTGACAAGTTAGAACCACACCAAGACCTGAAGCATATATCAATATCTGGTTACATGGGCACAAAATTTACAAAATGGGTTGGACGTTCTTCCTACCACAACATGACTTCAATATGTCTATCTGATTGTAAGAACTGCTGCATGCTTCCTTCACTTGGACAACTGCCCTCTCTCAAGACACTATATATTTGCCAATTGAACGGGTTGGAGACTGTTGGTGTTGAATTTTTGAAGAGCGATGAATCCTTTTCAGGGACATCTTTTCCCTCCCTACAATCTCTGACATTTGAAGACATGCCGAGTTGGGAGGTGTGGCGTCCATTCGAATCAAATGCTTTTCCTCAACTAAAGAAGCTCTCAATAAGCTATTGTCCCAGATTAAGGGGAGATTTGCCATATAACCTTCCAGCTTTGGAATCACTTGATATTAGCAGTTGTGAGCAGCTTGTTTCTTCTCTTCCAAGGGCTCCTGTCTTGCGTTGTTTAATCATAGAGGAAAGCAATAAAGCATCATTGCGAGAGATACCTCTTTCGGTGGAAGATCTACGAATCGAAGGAAGCGAGGTGGTGGAGTCTATGTTTGAGGCCATTACCATCCCCCAACCAACTTCTCTTCAATGTTTAGAGATATGGAGCTGTTCATCTGCAAGATCATTCCCGGGAGATTGTTTACCTCCATCATTGAAGAAGTTGATTATTTTTAATTTCAGGAAGCTAGAATTTCCAAAGCAGCAGCACGAGTTACTTGAGTCTTTGTTTATAAATAGTTGCTGTGATTCTCTCACATCCCTTCCATTGGAGAGCTTTCCAAATCTCCATTCTCTCACGATCAGAAACCTTGAAAATCTGGAAAGTCTTTCAGTGCAAGAAGTTGCTCTCACAGATTTCGTCATAGATGGCTGCCCCAAATTTGTATCATTCCCAAGAGAAGGATTGTCTGCTCCCGGTATGATTGAATTCTCCGTCTCGAATTGCGACAAGTTAAAGTCATTACCTTGTCACATGAGCACTCTTCTCCCAAAGTTAGAATCTCTCAAGATAGACAATTGCCAAGAAATTGAGTCATTTCCTAGTATGCCGCCTAGCTTGAGATCACTTGTGATTGGTAATTGTGAGAAATTAATGAGGAGTCCTTCCCTAGCTTCGGTGGACATGCTCACCCGTCTTACCATTAAAGGTCCATGTGACGGTGTCAAGTCCTTCCCGGAGGAGGGTTTGGTGTTGCTGCCTCCATCCCTTACTTCCCTGGAGTTAGTTAAATTAACAAGTATGGAGACGTTGGAGTGCAAGGGGCTTGTCCACCTCACCTCCCTGCAACAATTAACAATTGACCGCTGTCCGAAGCTGGAGAATGTGATGGGAGAAAGGCTGCCTGCCTCTCTAATAAAACTTCAAATCACTGAGTGTCCTCTGTTGAAAGAACATTGCCAAATGAAGCACCCGGAAATTTGGCCCAAAGTTTCCCACATCCGAGGCATTAAGGTTAATGGAAGACCGAAGATGGATGTTTGTTTTGCTAAACTGATTATTTGCATCTCTCGCATACATTGTCATCAAACTTTTGTGCTAGAGTTGAAAAATTTTGAGTTAAAAAACTACCACCTTAGCCTGGCAAGTCTCATACTCATAGAATCATTTTCCAAGCAATTTATTCAAAATAAGCAATTTATTCAAAATAACCATGTAGACATAATTTATAAAATTTCAGCAAAATCTCTTTTGATTTTCAATATTAAAATCATGTCTAGATATGAAAAACATAAAACCAGAAATATAATTAATAGGGTCACACATCTAGGTGCACCTAGGCCGTTACCTCCGTTAACGGCTACGGGGTTCTATCAAGGATCCCCAAAACCGTTTTCAGTCTCATCAAAAGTCTCAAAATCAACTTTCCAAGTTCATAATCTCGGTTTCACATAA 4128 0.3912 MAAVGGEAFLSAFIGVVMDRLASPEFANFIRGKKFDDNLLQRLKNTFYAVEAVMNDAEQKQIKDPAVKKWLDDLKDAVYVADDFLDHVSTKAATRKEEVSNFFSRYFNFQDRDMVNKLEDIVGRLESIFKLKDTLGLKEVARENYSWRLPSTSLDDGFNIYGRDQDKKVILKLLLDGNMSDGKVGVIPIVGMGGVGKTTLAQLVYNDEKLKQEFDLRAWVCVSDKCDILKVTKTIIEAITKSNCGLNDLNLLHLELKEKLVGRKFLIVLDDVWMEDYVEWNSLIKPLQFGTKGSKILVTTRIEKVASLIQTFQSYHLKQLLDEDCWLVFANHACFSSASNGNTTLEKIGRKIVRKCDGSPLAAQSLGGLLRGKHDIKDWNNILSCNIWELSENESKIIPALRISYHYLPPCLKRCFVYCALYPKDYMFEKDELILLWMAEDLLQPSKSGKTLEEVGCEYFDDLVSRSFFQRLGTSKRYFVMHDLVHDLAILLGGEFYFRSEELGKEIKICVKTRHLSLSGLSDEVYENSDFFGRVKFLRTLLPIHIKESPFNSEKAACIIMSRLKYLRVLSFGRFVEPLPNSIGELIHLRYLDLSYTLIKTLPESLCNLYNLQTLKLGGCSLLTMLPDGMYNLVNLRHLDIWGTQIKEMPKGMSGLKNLQHLSKFIVGKHEGQKIKELGKLSNLHGSLNICNLQNVANGNEALEAKLTDKKNLDRLRLYWSLKSHFTDSLAEMDILDKLEPHQDLKHISISGYMGTKFTKWVGRSSYHNMTSICLSDCKNCCMLPSLGQLPSLKTLYICQLNGLETVGVEFLKSDESFSGTSFPSLQSLTFEDMPSWEVWRPFESNAFPQLKKLSISYCPRLRGDLPYNLPALESLDISSCEQLVSSLPRAPVLRCLIIEESNKASLREIPLSVEDLRIEGSEVVESMFEAITIPQPTSLQCLEIWSCSSARSFPGDCLPPSLKKLIIFNFRKLEFPKQQHELLESLFINSCCDSLTSLPLESFPNLHSLTIRNLENLESLSVQEVALTDFVIDGCPKFVSFPREGLSAPGMIEFSVSNCDKLKSLPCHMSTLLPKLESLKIDNCQEIESFPSMPPSLRSLVIGNCEKLMRSPSLASVDMLTRLTIKGPCDGVKSFPEEGLVLLPPSLTSLELVKLTSMETLECKGLVHLTSLQQLTIDRCPKLENVMGERLPASLIKLQITECPLLKEHCQMKHPEIWPKVSHIRGIKVNGRPKMDVCFAKLIICISRIHCHQTFVLELKNFELKNYHLSLASLILIESFSKQFIQNKQFIQNNHVDIIYKISAKSLLIFNIKIMSRYEKHKTRNIINRVTHLGAPRPLPPLTATGFYQGSPKPFSVSSKVSKSTFQVHNLGFT* 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2759 1375 Gene3D - 14 119 - -
Lja5g2759 1375 PRINTS Disease resistance protein signature 356 370 - -
Lja5g2759 1375 PRINTS Disease resistance protein signature 868 884 - -
Lja5g2759 1375 PRINTS Disease resistance protein signature 259 273 - -
Lja5g2759 1375 PRINTS Disease resistance protein signature 186 201 - -
Lja5g2759 1375 SUPERFAMILY L domain-like 480 893 - -
Lja5g2759 1375 Pfam Rx N-terminal domain 9 105 IPR041118 -
Lja5g2759 1375 Gene3D - 320 403 IPR042197 -
Lja5g2759 1375 Coils Coil 40 60 - -
Lja5g2759 1375 Gene3D Ribonuclease Inhibitor 1027 1226 IPR032675 -
Lja5g2759 1375 SMART LRR_typ_2 586 609 IPR003591 -
Lja5g2759 1375 SMART LRR_typ_2 633 656 IPR003591 -
Lja5g2759 1375 Pfam NB-ARC domain 174 384 IPR002182 GO:0043531
Lja5g2759 1375 Gene3D - 141 314 IPR027417 -
Lja5g2759 1375 Gene3D - 404 490 IPR036388 -
Lja5g2759 1375 Gene3D Ribonuclease Inhibitor 522 928 IPR032675 -
Lja5g2759 1375 SUPERFAMILY L domain-like 935 1221 - -
Lja5g2759 1375 PANTHER DISEASE RESISTANCE PROTEIN RP 16 953 IPR044974 GO:0006952
Lja5g2759 1375 PANTHER OS05G0414200 PROTEIN 16 953 - -
Lja5g2759 1375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 419 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2759 Lja-Chr5 54643155 54649426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2759 187 489 WRKY Transcription Factor Family AT5G45050 24.516 7.95e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2759 - - gmx:100813244 1447.18