Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2752 ATGGAGAACCAACAAACACAACAAAGTTGGTTCGGAAGAGCAAAACCGGTCTTAGCTGTTGTGTCCTTACAGTGCGGATATGCAGTCATGGATATTCTGTCCAAGGCTGCAATGAACAAAGGGATGAGCAACTACGTCTTCGTCGTGTACCGCCACGCTGTTGCGTTCCTTGTCATCGCGCCTTTCGCATTGTATTTTGAGAAGAAAGTAAGGCCCAAGATGACATTGTCAATTTTTATGAAGATTGTGGCGCTCAGCGCGCTAGAGCCAGTTATTGACCAGAATTTGTATTTTTTGGGCATGAAGTACACAACTGCAACTTTTGCTGTTGCCATGACCAACATCCTTCCTGCCATTACCTTTATCTTTGCCTGCATTCTTAGGCTTGAGAAGATAAAAATGAAAACTATACGTAGCCAAGCAAAGGTGGTGGGAACTCTTGCAACGGTTTCTGGTGCCATGGTCATGACCCTGATGAAGGGCCCAGTACTTTTTGGGACCCACGGAAGCAACATTAACAATCAACATAACAGTGGGCCCAATACTCAACATGCAGTAGCAGGATCCATAATGATCGTAATTGGATGCTTTAGTTGGGCTTGTTTTGTGATTCTCCAAGCTATTACTCTTAAAACCTACCCTGCTGCACTCTCTCTTTCCTCATTGATATGCCTATTTGGAACAATTGAAGGTGCTGTAGTGGGTGTGATTATGGAGAGGGATAACCCTTCAGTTTGGTCTCTGAAATTGGATATAAGGCTGCTAACTTCAGTCTACACTGGCATAGTGTGCTCAGGAATTGGTTACTACTTGCAAGGAGTAGTGTTGAAAACTAAAGGCCCAGTCTTCGTGACAGCATTCAGTCCCTTGTGCATGGTGATTGTGGCAATCATGGGCTACTTCATTCTCGCCGAGCAAATGTTACTTGGAAGAGTGATTGGTGCCATAATCATTTGTTTGGGCCTGTACCTTGTGGTGTGGGGTAAAAGCAAAGACTACACTCCTCCAAATCCAACTCTTCAGGAGCTTACATTGCCGGAGAAGCAAACTGTAGATGAGGGAAGCGCTAAGAACGAACACTGTACTCACGAGGTCATCAACATTCAGTAA 1110 0.4468 MENQQTQQSWFGRAKPVLAVVSLQCGYAVMDILSKAAMNKGMSNYVFVVYRHAVAFLVIAPFALYFEKKVRPKMTLSIFMKIVALSALEPVIDQNLYFLGMKYTTATFAVAMTNILPAITFIFACILRLEKIKMKTIRSQAKVVGTLATVSGAMVMTLMKGPVLFGTHGSNINNQHNSGPNTQHAVAGSIMIVIGCFSWACFVILQAITLKTYPAALSLSSLICLFGTIEGAVVGVIMERDNPSVWSLKLDIRLLTSVYTGIVCSGIGYYLQGVVLKTKGPVFVTAFSPLCMVIVAIMGYFILAEQMLLGRVIGAIIICLGLYLVVWGKSKDYTPPNPTLQELTLPEKQTVDEGSAKNEHCTHEVINIQ* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2752 369 Pfam EamA-like transporter family 17 137 IPR000620 GO:0016020|GO:0016021
Lja5g2752 369 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Lja5g2752 369 PANTHER WAT1-RELATED PROTEIN 12 347 IPR030184 GO:0016021|GO:0022857
Lja5g2752 369 PANTHER WAT1-RELATED PROTEIN 12 347 - -
Lja5g2752 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 330 - -
Lja5g2752 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2752 Lja-Chr5 54506469 54509254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2752 13 369 Nodulin-like Gene Family AT2G37460 61.560 1.33e-158 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2752 - - gmx:100811147 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0925 1 9114394 9117831 Lja5g2752 5 54506469 54509254 PCT