Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2751 ATGTCTTTCAACAATCAAGCATTTTGGATGGGAAAGAGCCCTGAGTATTTGGACGATGGTGACATGACACATGATAGTTGTTCTAGAATGGATTCCAAGCGTGCTCATCAGGGGTTCATGGATGACCCTTCAGTGGACCTGTTTCCAAATAAGAAACAGGCAGTAGATGCTCCGATGAATTTATCATCAGGAATGCTCAATTCCAATACTTCTTCATGGGGAAACTCCTCTGGATTTCACTCTTTTACTGATCATTTTACTGAACAACTATTTCACCCAGATGCTGCATCTGTGAATTGTGAAAACGCGAACATTTGCCCTCTTAGCACCGATAATGAGTTGAGTCTGGAAAGAAAGGATATTGTGGATCCTTTCAGGAATGATTCCTCATTTGGTTTATCCATGTCAACTACATTAGATGATCCTCAATCAGTATTTAATCATGATGGAATTTCAAAAGTCAAAGTTAACGAGGTTAAGGAGTCTGAGAATGTCATGTCTGTTCCGGGTAATAATCCCTATGATAGGGGAGCTAGTAACAGTGTGTCAAATCCTCATGCATACGAGGGAGGCGATAATTCCATATCAATGAGTCTCCCCTACAACAAAGGGGATGCCAGTATATTGTTTACGGGTGATGCTTATGACAGGACAAATAACAATTTATTGACAATGGGTCAAACTTACAATGAGGGGGATCGCAACTTACCTATACATGCAATATACAAAGAGATCTGTCATACGATATCAATGGATCAAGGATTCAGTATGGTGGATAGTAATGTGATGTCTATTCCTCAAGCTTACAACAAGGCCCAAAACAATTCTATGTTAAGTAACCACTTATTTAGTGAGGTTGAGAATGGCACCATAGCGATGGGTAGCACTGATCACCAGAGAGAAAATGACATGCCATTTGTTTCTCATTCATATAATAAAGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATGATGATCCAACTTCTAGTTTATTCCTTTCCAACTACGGACTTTTGATGGGTCAAGCACCTTCACATAAGCCAGAAGCTGTGAATGCTAATGAGTTTGTTATATCTAGCTCTAATTTACCTTCAAGTACGGCTCAAACATCTGCCCTTGAAACTGAAAATGTTCCCCAAACAAGAGACGAGATAAAAGTGTCTAAGAAAGCTACTTCTAACAACTTCCCTTCCAATGTCAGAAGTTTGCTGTCCACTGGTATGCTGGATGGTGTCTCTGTAAAGTATAAAGCATGGTCACGGGAGAAGGAACTTCGAGGTGTTATAAAAGGTGCTGGGTATTTGTGCAGCTGCCAATCTTGTAATTTTTCGAAGGTTATTAATGCGTATGAGTTCGAACGACATGCTGGTTGCAAGACAAAGCACCCCAATAATCATATTTACTTTGAGAATGGGAAAACTATATACGGGGTTGTGCAAGAGCTTAGGAGCACTCCACAGAATATGTTATTTGAAGTTATTCAGACTATAACCGGTTCTCCTATCAATCAGAAATCCTTCCGCGTTTGGAAAGAATCCTTTTTGGCTGCAGCACGTGAACTCCAACGCATATGCGGAAAAGATGAAGTAACACAATTGTTATAA 1611 0.401 MSFNNQAFWMGKSPEYLDDGDMTHDSCSRMDSKRAHQGFMDDPSVDLFPNKKQAVDAPMNLSSGMLNSNTSSWGNSSGFHSFTDHFTEQLFHPDAASVNCENANICPLSTDNELSLERKDIVDPFRNDSSFGLSMSTTLDDPQSVFNHDGISKVKVNEVKESENVMSVPGNNPYDRGASNSVSNPHAYEGGDNSISMSLPYNKGDASILFTGDAYDRTNNNLLTMGQTYNEGDRNLPIHAIYKEICHTISMDQGFSMVDSNVMSIPQAYNKAQNNSMLSNHLFSEVENGTIAMGSTDHQRENDMPFVSHSYNKGESTIISFGGCDDDDPTSSLFLSNYGLLMGQAPSHKPEAVNANEFVISSSNLPSSTAQTSALETENVPQTRDEIKVSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRGVIKGAGYLCSCQSCNFSKVINAYEFERHAGCKTKHPNNHIYFENGKTIYGVVQELRSTPQNMLFEVIQTITGSPINQKSFRVWKESFLAAARELQRICGKDEVTQLL* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2751 536 MobiDBLite consensus disorder prediction 164 181 - -
Lja5g2751 536 MobiDBLite consensus disorder prediction 162 181 - -
Lja5g2751 536 PANTHER PROTEIN, PUTATIVE-RELATED 5 534 - -
Lja5g2751 536 Pfam Tify domain binding domain 429 484 IPR032308 -
Lja5g2751 536 PANTHER AUTOIMMUNE REGULATOR 5 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2751 Lja-Chr5 54502723 54505805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2751 364 516 PHD Transcription Factor Family AT3G53680 51.634 3.85e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2751 - - mtr:MTR_1g067750 764.992