Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2743 ATGCCGAATTTGTCTCCTGATTCTAGCTCTTGTGGTGGTGGGGTTGCAGACCAAGACTCATTCTCATCTAAATTCGGGCGGAGATCCTCTACACGTGTGTCTGGGATTCCAATTAAGAAGTTATTAGAGGAAGAGATGCCGACCAAAACTGAATCCAAAAGAAGATCCCCTGGTGTTATTGCCAGATTGATGGGTCTTGAAGGGTTGCCGTTTCAGCAGCCTGCTAATAAGCAGCACCATGGTTTTTCAGAAAAACATCCAGGGAAGGCAGCAGCGCAACTGGAGAAAACTCGAAGCAGAAGTGATGGCCGATCATCTAGAAGGAGCTCCAAAGATCCGGAAGAGTTTAAGGATGTATTTGAGGTCTCTGAGATCTCAAAGGTTGAGAGTGCTAGGTATTCATCACATGGGTGTGCAGACTTGAAGACCAATGATGCTGAAATGTCGTTCATTGAACAGAAGTTCATGGATGCCAAACGCCTTTCAACTTATCAGGATTTTCATTCTTCCAAGGAATTCCGTGATACACTTGAGGTTTTAGACTCTAACAAGGACCTTCTGCTGAAATACTTCAAGCGGCCAGATTCTTTGTTTAAAAAGCATTTGAATCATCTGCAAGCTCCCCCACACCAATCACATTCTGGACACTTGGATACTACAAATATTGAAAACTATGAACGTGACTTCAATTGGATGTCTGATAGGGAAGCCACAGGGTTGAATCACAATAGATTTCATCCGAAGCATCATCATGGTTTTCCTCGCCATGACAAACGACATCTGATGCATAGTTCTCCAAAATCATCAAAGCATCAGTTTAAAGGTGGCTATGAACAAGCAGCAGTCCCCACAAAGATTGTGGTCCTGAAACCTAATCTTGGAAAAGTGCTTAATGGTTCCAGAGTAGTATCGTCACCATATGCTTCCCATGATTTACTGTCGGAGCTTGGAAACCACACGGAACTTTCCGATGTCAGATTTAGAGACGCCAAACTGTATCAGACAACAGGTTTGCCTGATAGTGCTAGGTTTTGCAGGCAAGGTTCTTTGGAATCCAGAGAAATGGCAAAAGAAATCACGAGGCAAGTGAAAAGTAGTCTGAACAAGGGTTGCGTGATGCTTTCCTCTTCTAAATTTAGAGGATATGCTGGGGATGATAGTTCATGTAGTGTTTCTGGGAATGAATCTCCAGAGGAATCGGAGGAAACGACCACAACTTTGGGAAGCTCATTTGACATTAATAGCCGCAGCCGGTATTCATCCAATTCTAGTGAATCGTCTGTGAGCAGAGAGGCAAAGAAGAGACTGTCAGAGAGGTGGAAAGTGGCACACAAGTCTCAAGAGGTGCAAGTCAGCAGGAGCAGCACTCTGGCTGAAATGCTTGCCAACCATAATAATGAAATGAAGGCTGCATATTTTGACAGCATGGCTAGTAAGGAAGCTTCCCATGATCAATTTGCTAGCCATGGTGAACGTACTGGGTGGGTTGAACCAATTGGTATCAGCAGTAGGGATGGATGGAAGGACGGATGTATTGTAACTTTGTCAAGGTCAAGGTCTGTTCCTACTTCATCTACAGCCTTTGGGAGTCCTAGAACATTCTTGCGAACTGAAGCACTTCGTGATGATCGGTTTATGGTGTCAAAGGAAGCCCTTAAACGGGAGAGGAAAAGAGCAACCAAGAATCTTTATAATAGAGATGGTGCGAATACTAGAAGCACAAAATCTGGTCATAAGAAGTCTCTATCATTGCATTCAGTAAATCTGGAGGGTGATGGGTTTTTTCCAGACTTCAATACATTTCAGAATGAAATGAAAATCAATCTTGAAGAAGATTCACCCAAGCTAGACGTTCCAGCCACCAAATCCTCTGCTGAGACCCTCAGAGATACAAGGGTAGTTGCTGATGAAGTGGTGGATGTGGCAGATGAAAAAGCAGTTGGTTCTTCTGAATCTTCTTCTGATAAGGACCTCTCAGCTGGGTCTTCCGATGGAAGTTCAGTCTCCTCTAAACCACTACCTGGACTCGAATCTTCCTGTAAAGATGCTGATCAACCCAGTCCAATCTCAGTCCTAGAACCTTCTTGTACAGATGATCTGTCATCTTCTTCTGAATGTTTTGTAGGTCTCAGTGCTGACCTACAAGGGCTGCGAAAGCAACTCACCTTGCTGAAGTTGGAATCTGAAGATTATGAGGAGGGACCCGTTCTAATTTCAAATGATGAAGATGGTGGGGAAGCATGTACTGAAAAGTTTGAAGGGAGTCGATGGTGTAGAACTGAAGATAGCTGGGAATCTTCATACATTATGGATGCCTTGTCTGAATCTGGCTTTGATGGGGCTGACCCAGATACAATTTTGGAAGTTTGGAATTCCCTAGAATGCCCCATGAGCATTTCAGTGTTTCATGAACTTGAAAAGAGGTACTGTGATTGGACCACTTGTTCAAGGTCTGAAAGGAGAATGCTTTTCGACCGCATAAATTCAGGAATTTTCAAGATATACGAGCAATCCTTGTGCGGAAAACCTTGGGTCGGCCCTGCAACACCAGATATTGGTTCTCAATTGACTGAAAATGGGCTCCAAGATAGTATTGAAAGGTTGCTAGGGAGGCAAAGGGAAGTGACCGATGACATTTTAGGGAAGTTGCTGGTTATGGAGTCACAGTGGTTGGACTTGGGAGATGACATTGATGTCATTGGCAGTGAAATTGAGAGATTGCTGTTTGATGATTTGGTGGCAGAGATTGCCGGTGCCTAG 2760 0.4395 MPNLSPDSSSCGGGVADQDSFSSKFGRRSSTRVSGIPIKKLLEEEMPTKTESKRRSPGVIARLMGLEGLPFQQPANKQHHGFSEKHPGKAAAQLEKTRSRSDGRSSRRSSKDPEEFKDVFEVSEISKVESARYSSHGCADLKTNDAEMSFIEQKFMDAKRLSTYQDFHSSKEFRDTLEVLDSNKDLLLKYFKRPDSLFKKHLNHLQAPPHQSHSGHLDTTNIENYERDFNWMSDREATGLNHNRFHPKHHHGFPRHDKRHLMHSSPKSSKHQFKGGYEQAAVPTKIVVLKPNLGKVLNGSRVVSSPYASHDLLSELGNHTELSDVRFRDAKLYQTTGLPDSARFCRQGSLESREMAKEITRQVKSSLNKGCVMLSSSKFRGYAGDDSSCSVSGNESPEESEETTTTLGSSFDINSRSRYSSNSSESSVSREAKKRLSERWKVAHKSQEVQVSRSSTLAEMLANHNNEMKAAYFDSMASKEASHDQFASHGERTGWVEPIGISSRDGWKDGCIVTLSRSRSVPTSSTAFGSPRTFLRTEALRDDRFMVSKEALKRERKRATKNLYNRDGANTRSTKSGHKKSLSLHSVNLEGDGFFPDFNTFQNEMKINLEEDSPKLDVPATKSSAETLRDTRVVADEVVDVADEKAVGSSESSSDKDLSAGSSDGSSVSSKPLPGLESSCKDADQPSPISVLEPSCTDDLSSSSECFVGLSADLQGLRKQLTLLKLESEDYEEGPVLISNDEDGGEACTEKFEGSRWCRTEDSWESSYIMDALSESGFDGADPDTILEVWNSLECPMSISVFHELEKRYCDWTTCSRSERRMLFDRINSGIFKIYEQSLCGKPWVGPATPDIGSQLTENGLQDSIERLLGRQREVTDDILGKLLVMESQWLDLGDDIDVIGSEIERLLFDDLVAEIAGA* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2743 919 Pfam Domain of unknown function (DUF4378) 766 915 IPR025486 -
Lja5g2743 919 Pfam DUF761-associated sequence motif 51 70 IPR032795 -
Lja5g2743 919 MobiDBLite consensus disorder prediction 1 30 - -
Lja5g2743 919 PANTHER AFADIN 7 917 - -
Lja5g2743 919 MobiDBLite consensus disorder prediction 38 56 - -
Lja5g2743 919 MobiDBLite consensus disorder prediction 249 272 - -
Lja5g2743 919 PANTHER AFADIN 7 917 - -
Lja5g2743 919 MobiDBLite consensus disorder prediction 249 267 - -
Lja5g2743 919 MobiDBLite consensus disorder prediction 1 115 - -
Lja5g2743 919 MobiDBLite consensus disorder prediction 644 696 - -
Lja5g2743 919 MobiDBLite consensus disorder prediction 79 115 - -
Lja5g2743 919 MobiDBLite consensus disorder prediction 382 431 - -
Lja5g2743 919 MobiDBLite consensus disorder prediction 652 674 - -
Lja5g2743 919 Pfam Protein of unknown function (DUF3741) 152 196 IPR022212 -
Lja5g2743 919 MobiDBLite consensus disorder prediction 382 427 - -
Lja5g2743 919 Coils Coil 714 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2743 Lja-Chr5 54392422 54400869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2743 34 919 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 35.668 4.93e-134 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2743 - - ccaj:109788117 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0917 1 9015066 9022122 Lja5g2743 5 54392422 54400869 PCT