Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2724 ATGGCTACTGTTCGTCCTCCCCCGTTAACTTCCACCTCCGATCCTCCCCCACTTTTTGATGGAACCACCAGGTTGTACACCAATTATAATTGTCCCTATGCACAACGTGTGTGGATAACTAGGAACTACAAGGGGCTACAAGACAAGATTCAATTGGTTCCAATAGACCTTCAAAACAGGCCTGCTTGGTATAAGGAGAAAGTCTATCCAGAAAATAAGGTGCCATCCTTGGAGCACAATGGCAAGGTACTGGGAGAAAGTCTTGATTTGATCAAATATGTGGATGCCAACTTCGAAGGGCCGTCTATCTTTCCTAATGATCCTTCCAAGAAAGAGTTCGGTGAGGAGTTGATATCCCAAGTTGATACATTCACCAGAAACCTGTTCACTTCATTGAAAGGGGATGCTGTACAACAAACCAGTCCTTCCTTTGAATTCTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCTTTCTTGCTTGGTCAATTCAGTTGGGTCGATATTGCCTATATTCCATTTGTTGAGCGATTCCACATTGTCCTTGCTGAGGTATTCAAGCATGACATCACCGAAGGAAGGCCTAAACTCGCAGCGTGGATTGAGGAGGTGAACAAGATTGATGCTTATACACAGACAAGAATCGATCCTAAGGAAATAGTTGATATTTTCAAGAGTCGTTTTCTGCCTCAACAACAGTGA 702 0.4345 MATVRPPPLTSTSDPPPLFDGTTRLYTNYNCPYAQRVWITRNYKGLQDKIQLVPIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGPSIFPNDPSKKEFGEELISQVDTFTRNLFTSLKGDAVQQTSPSFEFLENALGKFDDGPFLLGQFSWVDIAYIPFVERFHIVLAEVFKHDITEGRPKLAAWIEEVNKIDAYTQTRIDPKEIVDIFKSRFLPQQQ* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2724 233 Pfam Glutathione S-transferase, C-terminal domain 136 202 - -
Lja5g2724 233 SFLD Glutathione Transferase (cytosolic) 24 205 IPR040079 -
Lja5g2724 233 SUPERFAMILY GST C-terminal domain-like 98 228 IPR036282 -
Lja5g2724 233 Gene3D Glutaredoxin 1 99 - -
Lja5g2724 233 Gene3D - 100 231 - -
Lja5g2724 233 SFLD Main (cytGST) 24 205 - -
Lja5g2724 233 Pfam Glutathione S-transferase, N-terminal domain 25 101 IPR004045 -
Lja5g2724 233 SUPERFAMILY Thioredoxin-like 15 101 IPR036249 -
Lja5g2724 233 CDD GST_C_Lambda 107 225 - -
Lja5g2724 233 PANTHER GLUTATHIONE S-TRANSFERASE L1 3 231 IPR044629 GO:0004364
Lja5g2724 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 21 102 IPR004045 -
Lja5g2724 233 PANTHER GLUTATHIONE S-TRANSFERASE TAU 3 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2724 Lja-Chr5 54095209 54097792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2724 5 229 Glutathione S-transferase Gene Family AT5G02790 69.778 8.45e-123 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2724 K00799 - gmx:547597 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0896 1 8799138 8801858 Lja5g2724 5 54095209 54097792 PCT