Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2708 ATGGACTGGAAATGGAGGCTACCCTTCTTCCTCTCACTCACTCTGCTGCTACTCTTGCGTCTTTCCTCTGCTCAGATGAAAGGTTTTGTAAGTTTGGACTGTGGAGGTAAAGAAAATTTCACTGATGAAATTGGTCTTCAATGGACTCCTGATGATAAAATGAGTTATGGAGAAATAAGCACTATTTCAGTTACCAACGAGACACGGAAGCAATACATGACGCTACGGCACTTTCCTGCAGATTCTAGAAAATACTGCTACACACTTGATGTTGTCAGTAGGACAAGGTACCTACTGAGGACAACATTCTTGTATGGGAACTTTGATAGCAACAATGTTTATCCGAAATTTGACATTTCTGTTGGGGCTACTCATTGGTCTACTATTGTTATATCTGATGCTAATACTATAGAAGTGAGAGAACTGATATTTTGGGCTTCAAGTCCCACAGTAAGTGTATGTTTGTCAAATGCAACAACAGGGCAACCATTCATATCTACACTTGAACTCCGGCAATTCAATGGTTCGGTTTATTATACAGATTATGAGGAACACTTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGAGAGCGATGCCCCAATCAGGTATCCTGATGACCCATTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAATTATCTTGTTGATGTTGCTCCTGGAACTACGAAAATTTCCACCAAAGAACCAATTGATGTTAACAGAGATGAAATGCCACCGGGGAGAGTAATGCAGACAGCTGTGGTGGGTACCAATGGATCTCTAACTTACCGAATGAACTTGGACGGTTTTCCTGGTATTGGATGGGCAGTTTGCTATTTTGCTGAGATTGAAGATCTGCCTCAAAATGAATCCAGAAAATTCAGGCTAGTACTTCCAGGCCAGCCTGATATTAGTAAGGCTGTGGTAAATATTGAAGAAAATGCTCTGGGAAAATACCGCCTTTATGAACCTGGTTATACCAATTTATCCCTACCCTTTGTGCTGTCCTTTAGATTTGGCAAAACATCTGATTCTACCAGGGGGCCTCTTCTAAATGCCATGGAGATTAATAAGTATCTGGAGAAAAATGGTGGCTCTCCTGACGGAGAAGCTATATCTAGTGTACTTTCACACTACTCTTCAGCAGACTGGGCACAGGAAGGGGGTGACCCATGTTTACCTGTTCCATGGTCATGGATCCGATGTAGCTCGGATATACAGCCAAGAATAGTTTCGATTTTGTTGTCTAGTAAAAACTTAACAGGCAATATTCCTTTGGACATCACCAAATTGACTGGTCTGGTTGAACTATGGCTTGATGGAAATATGCTGACTGGCCCAATACCAGATTTTACAGGATGCATGGACTTAAAGATTATCCATCTTGAGAACAATCAATTTTCGGGTGCGCTTCCAACCTCTTTGGTGAACCTTCCTAAATTGAGGGAACTGTGGGTCCAAAATAATATGTTATCTGGAACTGTACCGTCTGATCTTCTGAGCAAAGATCTGGTTTTGAACTACTCTGGAAACGTCAAGCTTCATAAAGGAAGCAGAAGAAAGAGCCACATGTATGCGATTATTGGTTCAGCAATTGGGGCTGCTGTTTTACTTTTAGCTACTATTATATCTTGCTTGTTTATGCATAAAGGAAAGAAAAAATATTATGAGCAAGGCAACCTTAATTCTCTCCCTTCTCAAAGTATGGATTTTTCAAAAGCCAATGGTCCGGCAGAAGCTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAATTCTACAAATAATTTTGAGAAAAAAATTGGTTCTGGAGGTTTTGGAGTTGTTTACTATGGGAAACTGAAGGATGGAAAAGAGATAGCAGTTAAAGTTCTGACCAGTAATTCCTATCAAGGCAAACGAGAGTTCTCCAACGAGGTGGCTCTTCTATCAAGAATACATCACAGAAACCTGGTACAGCTTCTTGGATATTGCCGAGAAGAAGGGAATAGTATGCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTCTACGGTCCATTAACACACGGACGGAGTATCAATTGGATCAAGCGACTCGAGATTGCAGAAGATTCGGCCAAAGGGATTGAATATCTTCACACAGGCTGTGTTCCTGCAGTTATCCATAGAGACTTAAAAAGCAGCAACATTCTTCTTGACAGGCAATTGAGAGCCAAGGTTTCAGATTTTGGTCTTTCAAAGCTTGCTGTTGATGGAGTCTCCCATGTCTCTAGCATAGTTCGGGGCACAGTGGGATATCTGGATCCTGAGTACTATATTTCCCAGCAGCTGACAGATAAGAGTGATATTTATAGTTTTGGTGTAATTCTTCTTGAGCTGATATCTGGTCAGGAAGCAATATCTAACGACAGCTTTGGTGCTAATTGCCGAAACATAGTCCAATGGGCAAAATTACACATTGAGAGTGGAGACATACAAGGCATCATTGATCCAGCGCTAGGAAACGACTATGACCTGCAATCAATGTGGAAGATAGCGGAGAAGGCATTGATGTGCGTTCAACCTCACGGACACATGCGGCCATCGATTTCAGAAGTTCTGAAGGAAATCCAAGACGCAATTGCCATTGAGAGAGAGGCCGAAGGGAACTCAGAAGAGTTGCCGGTAAGAAACTCCGGTCACGCTTCTTCCATGAACATGGGTTCTATGGATTTTTCCGCCACAGAGAATTACATCTCAATTGATGAATCCATTGCACAGCCTACCGCACGATAG 2778 0.4165 MDWKWRLPFFLSLTLLLLLRLSSAQMKGFVSLDCGGKENFTDEIGLQWTPDDKMSYGEISTISVTNETRKQYMTLRHFPADSRKYCYTLDVVSRTRYLLRTTFLYGNFDSNNVYPKFDISVGATHWSTIVISDANTIEVRELIFWASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTDYEEHFYLSVSARINFGAESDAPIRYPDDPFDRIWESDSVKKANYLVDVAPGTTKISTKEPIDVNRDEMPPGRVMQTAVVGTNGSLTYRMNLDGFPGIGWAVCYFAEIEDLPQNESRKFRLVLPGQPDISKAVVNIEENALGKYRLYEPGYTNLSLPFVLSFRFGKTSDSTRGPLLNAMEINKYLEKNGGSPDGEAISSVLSHYSSADWAQEGGDPCLPVPWSWIRCSSDIQPRIVSILLSSKNLTGNIPLDITKLTGLVELWLDGNMLTGPIPDFTGCMDLKIIHLENNQFSGALPTSLVNLPKLRELWVQNNMLSGTVPSDLLSKDLVLNYSGNVKLHKGSRRKSHMYAIIGSAIGAAVLLLATIISCLFMHKGKKKYYEQGNLNSLPSQSMDFSKANGPAEAAHCFSFSEIENSTNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVALLSRIHHRNLVQLLGYCREEGNSMLIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRQLRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGIIDPALGNDYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIEREAEGNSEELPVRNSGHASSMNMGSMDFSATENYISIDESIAQPTAR* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2708 925 Gene3D Transferase(Phosphotransferase) domain 1 675 892 - -
Lja5g2708 925 SUPERFAMILY Protein kinase-like (PK-like) 580 869 IPR011009 -
Lja5g2708 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 721 733 IPR008271 GO:0004672|GO:0006468
Lja5g2708 925 Gene3D Phosphorylase Kinase; domain 1 574 674 - -
Lja5g2708 925 PANTHER TYROSINE KINASE DOMAIN PROTEIN 13 898 - -
Lja5g2708 925 SUPERFAMILY L domain-like 400 506 - -
Lja5g2708 925 Pfam Protein tyrosine and serine/threonine kinase 601 801 IPR001245 GO:0004672|GO:0006468
Lja5g2708 925 Pfam Malectin-like domain 32 362 IPR024788 -
Lja5g2708 925 ProSiteProfiles Protein kinase domain profile. 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2708 925 CDD STKc_IRAK 605 872 - -
Lja5g2708 925 ProSitePatterns Protein kinases ATP-binding region signature. 605 627 IPR017441 GO:0005524
Lja5g2708 925 PANTHER OS07G0107800 PROTEIN-RELATED 13 898 - -
Lja5g2708 925 SMART serkin_6 599 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2708 925 Gene3D Ribonuclease Inhibitor 376 526 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2708 Lja-Chr5 53782170 53790056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2708 22 709 Receptor kinase-like Gene Family AT2G37050 67.482 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lja5g2708 Malectin_like 6.1e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2708 - - gmx:100798007 1620.91