Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2693 ATGGGGAGGAAGGGAAATTGGTTTTCGACTGTGAAGAAAGCTCTTAGCCCCGAGTCAAAGGAGAAGAAGGATCAGCTGCTTTTGCAGAAATCAAGTAGATCAAAGAAAAAATGGTTTGGGAAGCAAAAGTTGGAGACTTCAGAACCACACGTGGAAACTGATACATCACCTCCCCTTCCTCCACCTGAGGAGGTTATTTTAACTCATGTTGAGAATGAAAACAACCACAATAATGTTGAGATTACAATTGCCGCGGATGCTGAGGGATCTATTCCTGCTGTTCAGACAGAAGTTGCTGAGGTTCAAGCCACTACAGTTGTTCAGTTTGCCTGTAAACCAAGCGATGAAGTGGCAGCACTCAAGATTCAAACAGCTTTTCGTGGATACATGGCAAGAAGAGCATTGCGAGCTTTAAGGGGGCTGGTCAGGTTGAAATCACTGATGGCAGGGCCGGTGGTAAAGAGACAAGCCATCAGTACGCTTCGCTCTATGCAAACATTAGCTCATGTGCAATCTCAGATTCGTTCTAGGAGGCTCAGGATGTTGGAGGAGAACCAAGCTCTGCAAAAACAGCTCTTAAGCAAGCACACAAAAGAACTAGAGAGCTTGAAGATTGGGGAGGAATGGGATGACAGCCTACAATCAAAAGAACAGGTTGAAGCTAAGTTACTAAGCAAGTATGAGGCCACTATGAGAAGAGAAAGAGCCATGGCTTATTCATTCTCTCATCAGCAAAACAAGGATTCATCAAAATCTATAAACCCGATGTTCATGGATCCTACCAATCCTTCCTGGGGTTGGAGCTGGTTGGAACGATGGATGGCAGGCGCCGAGTGCCAGAACCTGACAGCGAAAGAGAAGAACGACCAATCATCTGCAAAAAGTTCAAGCCGCATGATTACCAGCGCTGAGATCAGCAAATCCTTTGCTCGTTTCCAGCTCAATTCCGAAAATCATTCTCCAACCGCCAGCCAAAATCCCGGCTCACCTAACTTCCAGTCCCATTCTAATCCTCCGAAGCCAGCAGCCAGTAAGAAACTGAAGAAGGCAAGCCCACGGGACAGCCGGGTTATGGATGATGACATGAAAAGCATGGTAAGTATGCAATCAGAAAGGAGGCACTCGATTGCGGGATCAACAATCAGAGATGATGAAAGCCTTGCAAGCTCTCCATCAGTTGTTCCAAGTTACATGGTGCCAACTAAATCTGCAAAAGCTAAGTCCAGGATGCAAAGTCCATTAGCTGCTGAGAATGGAACCCCAGAGAAGGGGGGGTTTGGGACTGCAAAGAAAAGGCTATCTTTCCCGGCTTCCCCCGCCAGACCGAGGCGGCATTCAGGTCCACCAAAGGTAGACAGCAGCTTGAATGCAGAAATCACTGTTGGCAATGGTGTGGCTGGTTGA 1404 0.4715 MGRKGNWFSTVKKALSPESKEKKDQLLLQKSSRSKKKWFGKQKLETSEPHVETDTSPPLPPPEEVILTHVENENNHNNVEITIAADAEGSIPAVQTEVAEVQATTVVQFACKPSDEVAALKIQTAFRGYMARRALRALRGLVRLKSLMAGPVVKRQAISTLRSMQTLAHVQSQIRSRRLRMLEENQALQKQLLSKHTKELESLKIGEEWDDSLQSKEQVEAKLLSKYEATMRRERAMAYSFSHQQNKDSSKSINPMFMDPTNPSWGWSWLERWMAGAECQNLTAKEKNDQSSAKSSSRMITSAEISKSFARFQLNSENHSPTASQNPGSPNFQSHSNPPKPAASKKLKKASPRDSRVMDDDMKSMVSMQSERRHSIAGSTIRDDESLASSPSVVPSYMVPTKSAKAKSRMQSPLAAENGTPEKGGFGTAKKRLSFPASPARPRRHSGPPKVDSSLNAEITVGNGVAG* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2693 467 MobiDBLite consensus disorder prediction 382 397 - -
Lja5g2693 467 MobiDBLite consensus disorder prediction 317 467 - -
Lja5g2693 467 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 463 - -
Lja5g2693 467 MobiDBLite consensus disorder prediction 347 368 - -
Lja5g2693 467 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Lja5g2693 467 PANTHER IQ-DOMAIN 5-RELATED 1 463 - -
Lja5g2693 467 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Lja5g2693 467 MobiDBLite consensus disorder prediction 15 31 - -
Lja5g2693 467 MobiDBLite consensus disorder prediction 317 340 - -
Lja5g2693 467 Pfam Protein of unknown function (DUF4005) 379 444 IPR025064 -
Lja5g2693 467 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2693 Lja-Chr5 53564222 53568353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2693 1 466 IQD Protein Family AT5G03040 51.129 9.97e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2693 - - gmx:100799058 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2693 5 53564222 53568353 Lja5g2693 5 53564222 53568353 ECH
Lja1g0880 1 8633836 8637671 Lja5g2693 5 53564222 53568353 PCT