Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2683 ATGGCGGCTAACCATTGTTCTAATATTTGTTTCCTCCTTCTATTGCTTCTCTCACATTTTAATTTGGGCAAAAGCCAACTTCAGCTGAACTACTACTCCCAAAGCTGTCCAAAAGCAGAAGAGATCATCAAGCAACAAGTGATCAAGCTATATAACGAGCACGGAAACACCGCAGTTTCATGGGTTAGGAATCTCTTCCATGATTGCATAGTCAAGTCATGTGATGCATCGCTACTTTTAACAACCGTGCGCGGGGTTGTGTCGGAGCAGACGTCGGGGAGAAGTTTTGGGATGAGGAACTTCAAGTTCGTGAACACCATCAAAGCTGCTGTTGAGGAAGAATGCCCCTTGACTGTGTCATGTGCTGACATTGTTGCTCTTTCAGCTAGAGATGGCATTGTCATGTTGGGAGGTCCAAGTATTGAGATGAAGACAGGGCGAAGGGATAGCAAAGAAAGCTATGCAACGGTGGTGGAAGATTTCATTCCCAACCACAATGACTCCATATCCTTAGTGCTCTCTCGTTTTCAATCCATTGGCATTGATGTTGAAGCCACAGTCGCTCTTCTAGGAGCACACTCAGTGGGAAGAGTTCACTGTACGAATATGGTGCAGAGGCTCTATCCTGATGTGGACAAAACGATGGACCTTGCACAAGCTGAGTACCTGAAACGTCGATGCCCGACACCAAATCCCGATCCAAAAGTTGTCCAATATTCGAGGAATGATCAGATAACCCCCATGATCATTGACAACAACTACTACAAGAACATCTTGCAACACAAGGGCCTTCTCACTGTAGATGAGGAACTCGCCACTGACCCAATAACCTCACCGTATGTCATAAAAATGGCGGCGGACAATGAATACTTCCACCAACAGTTCTCAAGGGCCATTATCTTGTTATCAGAGAATAATCCTATAACTGGTGACCAAGGAGAAATCAGAAAGGATTGTCGCTATGTCAATGCCAATTAA 978 0.4499 MAANHCSNICFLLLLLLSHFNLGKSQLQLNYYSQSCPKAEEIIKQQVIKLYNEHGNTAVSWVRNLFHDCIVKSCDASLLLTTVRGVVSEQTSGRSFGMRNFKFVNTIKAAVEEECPLTVSCADIVALSARDGIVMLGGPSIEMKTGRRDSKESYATVVEDFIPNHNDSISLVLSRFQSIGIDVEATVALLGAHSVGRVHCTNMVQRLYPDVDKTMDLAQAEYLKRRCPTPNPDPKVVQYSRNDQITPMIIDNNYYKNILQHKGLLTVDEELATDPITSPYVIKMAADNEYFHQQFSRAIILLSENNPITGDQGEIRKDCRYVNAN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2683 325 Gene3D Peroxidase, domain 2 163 302 - -
Lja5g2683 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Lja5g2683 325 PANTHER PEROXIDASE 25-RELATED 13 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PANTHER PEROXIDASE 21 13 322 - -
Lja5g2683 325 Pfam Peroxidase 44 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 SUPERFAMILY Heme-dependent peroxidases 26 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 Gene3D - 30 323 - -
Lja5g2683 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2683 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2683 Lja-Chr5 53466812 53470076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2683 29 323 Peroxidase AT2G37130 74.662 1.31e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2683 K00430 - gmx:100811277 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2683 5 53466812 53470076 Lja5g2683 5 53466812 53470076 ECH