Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2671 ATGGCATCCAATAGAGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGCAAAAAATGAAAAATTGGCTAGGTTGAAACAGGCTAAGGAAGAGGCTGACAAGGAGATTGCTGAATACCGAGCTAAGCTAGAGCTTGAGTTTCAAAAGAAAGTTTCAGATAGTAGCGGAGATTCCGGAGCTAATGTGAAGCGGCTTGAGCAAGAGACTCAAGCGAAAATCCAGCACCTGCAAACCGAGGCTGCAAGAATATCGGATGATGTTGTCGCTATGCTCCTTAAGTATGTAACAACTGTGAAAAATTAG 333 0.4354 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEADKEIAEYRAKLELEFQKKVSDSSGDSGANVKRLEQETQAKIQHLQTEAARISDDVVAMLLKYVTTVKN* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2671 110 Coils Coil 10 59 - -
Lja5g2671 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 110 - -
Lja5g2671 110 Gene3D - 1 110 - -
Lja5g2671 110 Coils Coil 76 96 - -
Lja5g2671 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lja5g2671 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Lja5g2671 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2671 Lja-Chr5 53279009 53281564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2671 1 110 Primary Pumps ATPases(2) AT3G01390 73.636 1.75e-44 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2671 K02152 - gmx:100306550 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2671 5 53279009 53281564 Lja5g2671 5 53279009 53281564 ECH