Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2628 ATGTTAGAGAGTGATGGCATTGATGATGTCACCCTTCTTGTGAATTCATCACCGAGCAAGATGATGGGTGCAAATCTTGGATATAACAATGGATTCCCATCCATGACCAGTTCTGTGCTATGTGCCAAAGCATCCATGTTGTTACATAATGTCCCTCCAGCTATTCTTCTTAGATTCTTGCGGGAGCACCGATCAGAATGGGCAGATAGGAGTATTGATGCTTACTCAGCTGCTGCCATTAAAGCTGGCCCCTGTAGCTTGCCAGGGGCCAAAGGAAGTTTTGGGGGTCAGTTCATGGAGGTTATTAAGCTTGAAAACATGGGCTACTATCGGGACGACATGACTATGCCTGGTGATGTTTTCCTCTTGCAACTTTGCAGTGGAGTGGATGAGCATGCAGTTGGCACCAGTGCAGAACTAGTTTTTGCTCCAATAGATGCGTCTTTCTCTGATGATGCACCCATTTTACCTTCCGGTTTTCGTATTGTACCTCTTGATTCTGGCACGGCAAGTCTTTAG 519 0.4605 MLESDGIDDVTLLVNSSPSKMMGANLGYNNGFPSMTSSVLCAKASMLLHNVPPAILLRFLREHRSEWADRSIDAYSAAAIKAGPCSLPGAKGSFGGQFMEVIKLENMGYYRDDMTMPGDVFLLQLCSGVDEHAVGTSAELVFAPIDASFSDDAPILPSGFRIVPLDSGTASL* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2628 172 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 168 IPR044830 GO:0003700
Lja5g2628 172 PANTHER BNAC03G66860D PROTEIN 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2628 Lja-Chr5 52275864 52277991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2628 1 172 Homeobox Transcription Factor Family AT4G32880 71.123 1.10e-84 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2628 K09338 - lja:Lj1g3v4468020.2 325.479