Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2620 ATGGCTGAAATTGAAGCCTACATCCAACTTCTCCTTGTGTGGATTCTCTCCACAATCACAGTGCGAGCCATAGTCATACTCACCCGAAAGCATATCAACAAGAATCCTCTTCCACCAAGCCCTTTAGCACTACCCATAATCGGACACCTTCACCTCCTTTCCCGTTTACCTGATCACCAGAAATTTCAAAATCTCTCAACTCGCTATGGGCCCATCATGCAAATCTTCCTAGGCTCTCGCCCTTGTGTGGTGGTGTCCACTCCAGAAATCGCCAAGGAGTTTCTCAAAACCAATGAAGCCTCCTTCTCCGACCGGTTCGTCGGGGCCGGAATTCACTACTTATCATACGGCTCGAAGGGCTTCCTGTTCGCGCCGTACGGCGAGCAGTGGAAGTTTATGAAGAAGCTCTGCGTGTCAGAGCTTCTCGGCAGCCGGACGCTTAACCTTCTCCTTCCGGTGAGGCGACAGGAGACACTGCGGTTCCTGAAGCTTCTCCGGAGAAAAGGGGAAGCGGGCGAGGCTGTCGATGTTGGCGGCGAGCTCATCACTCTAATCAACAGTGTCATCACAAGGATGATCATGGGAAGAACGGCGTGTTGTTCTGATCATAATGATGTTATTGAAGATTTGGAAGTGGAGAAAATCAGGAAGATGGTGACAGACACTGCAGAGTTCTTGGGGAAGTTTGATCCTTCGGATTTTATCTGGTTTTGGAAGTATTTGAATTTGCAGGGAATGAGCAAAAGAGTTATGGAGATTCATGACAGGTTTGACAACATGATGGAGAGGATGATGCAGGAGAATGAAGATGAGAGGAAGAAAAGGAAGGAAAAGGGTGAAGAAGGTTCTGATCAGATTAGGAATCTGCTTGATATTTTGTTGGAAATTCATGAGAATGAGAGCTCTAAGACAAAATTGACCAGAGAAAACATCAAGGCTTTCATCAAGGACTTATTATTTGCAGGAACAGACACATCTGCTAAAACTATAGAATGGGCTTTAGCTGAGTTAATCAACCACCCACATGTGATGGAGAAAGCAAGACAAGAGATTGATTCACTAACAGGAAATAACAGATTAATAGAAGAGTCAGATCTTCCTAATCTTCCTTACTTGCGAGCTATCGTTAAAGAAACACTAAGGATTCACCCCGCAGTGCCAATAATAATGAGGGAATCATCTGAAAGGTCTTATGTTTGTGGCTATGAGATTCCAAAAAAGACCTTGCTATTTGTTAATTTGTGGTCCATGGGTAGGGACCCTAACCTGTGGGAGAACCCACTTGAGTTCAGGCCAGAGAGGTTTAAGGATGAAGAGTGCAATTCAGATTTGAGGGGACAAAATTTCCAACTAATGCCATTTGGAACTGGAAGAAGGGTTTGTCCTGGATCCTCACTAGCACTTCAGATTGTACCTACTAATCTTGCTGCTATGATTCAGTGTTTTGAATGGAAGGTTGACAGTGAAGGAAACAATGGCAGCGACAAAGTTAGCATGGAAGAGAAGCCATCCATATCCCTTCATAGGGCTCATCCTCTTATTTGTGTACCTGTGCCTCGCTTTAATTGTTTGGTTGATTGA 1581 0.4472 MAEIEAYIQLLLVWILSTITVRAIVILTRKHINKNPLPPSPLALPIIGHLHLLSRLPDHQKFQNLSTRYGPIMQIFLGSRPCVVVSTPEIAKEFLKTNEASFSDRFVGAGIHYLSYGSKGFLFAPYGEQWKFMKKLCVSELLGSRTLNLLLPVRRQETLRFLKLLRRKGEAGEAVDVGGELITLINSVITRMIMGRTACCSDHNDVIEDLEVEKIRKMVTDTAEFLGKFDPSDFIWFWKYLNLQGMSKRVMEIHDRFDNMMERMMQENEDERKKRKEKGEEGSDQIRNLLDILLEIHENESSKTKLTRENIKAFIKDLLFAGTDTSAKTIEWALAELINHPHVMEKARQEIDSLTGNNRLIEESDLPNLPYLRAIVKETLRIHPAVPIIMRESSERSYVCGYEIPKKTLLFVNLWSMGRDPNLWENPLEFRPERFKDEECNSDLRGQNFQLMPFGTGRRVCPGSSLALQIVPTNLAAMIQCFEWKVDSEGNNGSDKVSMEEKPSISLHRAHPLICVPVPRFNCLVD* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2620 526 Pfam Cytochrome P450 38 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 Gene3D Cytochrome P450 23 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Lja5g2620 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 525 - -
Lja5g2620 526 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 525 - -
Lja5g2620 526 Coils Coil 344 364 - -
Lja5g2620 526 Coils Coil 254 281 - -
Lja5g2620 526 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2620 526 SUPERFAMILY Cytochrome P450 38 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2620 Lja-Chr5 52043279 52045632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2620 1 520 Cytochrome P450 AT5G06900 46.538 5.89e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2620 K24188 - gmx:100805931 657.136