Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2612 ATGTTGAAAAGGATGAAGAATTTCAGTTTCCACGTTCTCACCGGAAGCTGGTTCTTGGTCTTTGCCTCTATTCTAATCATGGCCTTTTCAGGAACAACCTACTTGTTTGGTCTCTACTCAAGCCAAGTGAAACACTCTTTGGGTTATGACCAAACCACTCTGAACCTCATCAGCTTCTTCAAAGATATAGGCACCAACGTTGGAATCGTCTCGGGGCTAATCAGTCAATTCACCTCTCCATGGGTGGTCCTCGCGATTGGAGCCACCATGAACCTCGTCGGATACTTCATGGTATGGCTCTCCGTCACGGGACACGTCGTGAAGCCACAAGTGTGGCAAATGTGTCTCTACTTTTACATTGGGGCTAACTCACAGGCCTTTGCCGGTACCGCGGTGCTGGTGAACTGTGTTAAAAGCTTCCCGCAAAACCGAGGCAGTGTCCTCGGTCTTGCCAAGGGTTACATGGGTCTTAGTGGCGCCATTTTCACGCAGCTCTACCATGCTTTCTATGGTGACAACCTCGATGCTCTCATTCTCTTCATTGCTTGGCTTCCGGCCGCCATTTGCTACGTCTTGCTTCCAGCATTCCGGGCTATAGATAAGACCCCACCACAACAGGAGAACGAAAACAAAGTTTTTTACAAGTTTCTGTACCTTTCACTAGGCCTTGCAGGGTTTCTGATGGTACTCATCATTGTGCAGAACAAGATCAACTTTCTAAGGGTTGAGTACATTGTGTGTGCCATGGTGGTTCTTTTCTTACTTCTTCTCCCACTTGCTTTGGTGTTTACAGAGGAGTTCAGGATCTGGACCCAAAAGATTCAAAAGAAACAAAATCAAAACTTGTTCAATGATGATTCACAATTGAAAGTAGCTGTGGATTTGAATCTGAATTTGCAGAAGGAAGCACCAACTGCCCCAAGTACAACAACAACACCACAAAAGAAAATTTGTGGTCTGAATTTTACAAGCAAAATGCTGAAACCCCCACATAGGGGTGAAGATTACACCATCTTACAAGCTTTGTTGAGCATTGATATGTGGGTTCTGTTGATTTCAACAACTATTGGAATTGGTGGGACATTGACTGCACTTGACAATTTGGGACAAATTGGGAACTCTTTGGGGTACCCCAAGAAGAGTCTTACAACATTTGTGTCCCTTGTGAGTATATGGAACTATCTTGGAAGAGCAATGTGTGGCTATGCCTCTGAATACTTGTTATCTAAATACAGATTCCCTCGTCCATTGATGTTAACTCTGGTAATGCTTCTCTCTTGTGTTGGCCATCTCTTGGTAGCGTTCGGTGTGCCGAACTCTCTCTACATTGCTTCTCTGATTAATGGGTTTTGCTTTGGGGCTTTATGGCCTTTAATGTATGCCATCATATCTGAGATTTTTGGCCTCAAATACTACTCAATTTTGCTTCATTTTGGAACCATGGCAAGCCCTCTTGGGTCTTACTTGCTCAATGTGAGAGTGGCTGGTTATCTTTATGATAAGGAGGCTTTGAAGCAATTGCATATGAAGGGGCTCACAAGGCAAGCAGGGAAGGAGTTAAATTGTTCAGGAGTGGAGTGTTATAAGATGGCTTTTTTCATAATCACAGCATCCACTTTGGTAGGTTGTTTTTCTTCTATCGTTTTGGTGTTAAGGACCAGGAAGTATTACAAAAGTGTCACATATGAAAAGTTTAGAGCAGTGGAAGCAGAGAAAGCAGAGACCAGTGCAGTTGCTACTCCAGCTGCCACCACCACAAGTCACTCGTAA 1770 0.4407 MLKRMKNFSFHVLTGSWFLVFASILIMAFSGTTYLFGLYSSQVKHSLGYDQTTLNLISFFKDIGTNVGIVSGLISQFTSPWVVLAIGATMNLVGYFMVWLSVTGHVVKPQVWQMCLYFYIGANSQAFAGTAVLVNCVKSFPQNRGSVLGLAKGYMGLSGAIFTQLYHAFYGDNLDALILFIAWLPAAICYVLLPAFRAIDKTPPQQENENKVFYKFLYLSLGLAGFLMVLIIVQNKINFLRVEYIVCAMVVLFLLLLPLALVFTEEFRIWTQKIQKKQNQNLFNDDSQLKVAVDLNLNLQKEAPTAPSTTTTPQKKICGLNFTSKMLKPPHRGEDYTILQALLSIDMWVLLISTTIGIGGTLTALDNLGQIGNSLGYPKKSLTTFVSLVSIWNYLGRAMCGYASEYLLSKYRFPRPLMLTLVMLLSCVGHLLVAFGVPNSLYIASLINGFCFGALWPLMYAIISEIFGLKYYSILLHFGTMASPLGSYLLNVRVAGYLYDKEALKQLHMKGLTRQAGKELNCSGVECYKMAFFIITASTLVGCFSSIVLVLRTRKYYKSVTYEKFRAVEAEKAETSAVATPAATTTSHS* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2612 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 580 - -
Lja5g2612 589 SUPERFAMILY MFS general substrate transporter 217 555 IPR036259 -
Lja5g2612 589 Pfam Nodulin-like 17 262 IPR010658 -
Lja5g2612 589 SUPERFAMILY MFS general substrate transporter 12 194 IPR036259 -
Lja5g2612 589 CDD MFS_Mch1p_like 17 543 - -
Lja5g2612 589 PANTHER MFS TRANSPORTER 3 580 - -
Lja5g2612 589 Gene3D MFS general substrate transporter like domains 343 562 IPR036259 -
Lja5g2612 589 Pfam Major Facilitator Superfamily 370 558 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2612 Lja-Chr5 51921281 51923391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2612 5 566 Nodulin-like Gene Family AT2G39210 56.306 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2612 - - gmx:100814000 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2612 5 51921281 51923391 Lja5g2612 5 51921281 51923391 ECH