LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja5g2607	ATGGCTCACCACATACATAGCAAAGCATTCATCAAAAAAAAAAGAACATACATTGCAAAGCATCTGACTCACATCAAAATGTTCAACTCCCTTTCTCCCATCTCCCTCTCCACCTTCTCCCAATTCAATTTCTCTGCTATGGCCAACACCAACCGCTCTAGCCATCCTTTTTGTCCTCTTACGATTGATTCCTATGCCCGGGCTCTTAAAAAAATTTCATCTCCAACATTAGCTCCCAAAACTGAGATTGGTGTCACTTACAGAGATGTGAATCCCACATCTATGCTGAACACGAGAAATCAACCACTTGCTGGTCATGCTGAGATGAATATTTTTTCTAATCATGAGATTGATGAAAGTCATGATGGTAGGATCCATAGTGTTCCGTATATAAAAAATGGGCCATATACGTGCCCTAAGTGCAAAGCACAGTTTGTGACCTCACAAAGCTTTGCAGCGCATGCCACCTCAAGTCACTACAAATATGAAAGCAAAGATCAAAGAAGGAAGAGGCTTATGAAAAGAGTCCGAATGAGAAACCTTACTCTTCAAAAGGTTAGTGGTGCACTCACTGTTGTTCCTGTTTCTTCTGAGGCTGCAAGGACTGCAAATGTTATTGAGCAAGGTGGAAATGGTCTTGCTAATGCTACAAGGACCAACTATGTTAGTGATGGACTCACTTTTGTTCCTGTTTCTTCTGAGGCTGCAAGGACTGCAAAGGCTGTTGAACAAGGTGGAAAAAGACTTGCTAATGCTACAGGGACCAGCTACGTTGCAAGGTTTGCTTATCAAGATGGAGGAGGCCTTACTAAAAGGGTGAAAGTAGAAGGTGGCCTTCATAGCCATTATCAGGTTTCTCCTCCTGGAATGGAAGCTCGTGGTGTTGGAGCAACTGGTGTCAAAATCAAATCGGAGCGTTATGCATAA	927	0.4272	MAHHIHSKAFIKKKRTYIAKHLTHIKMFNSLSPISLSTFSQFNFSAMANTNRSSHPFCPLTIDSYARALKKISSPTLAPKTEIGVTYRDVNPTSMLNTRNQPLAGHAEMNIFSNHEIDESHDGRIHSVPYIKNGPYTCPKCKAQFVTSQSFAAHATSSHYKYESKDQRRKRLMKRVRMRNLTLQKVSGALTVVPVSSEAARTANVIEQGGNGLANATRTNYVSDGLTFVPVSSEAARTAKAVEQGGKRLANATGTSYVARFAYQDGGGLTKRVKVEGGLHSHYQVSPPGMEARGVGATGVKIKSERYA*	309

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja5g2607	308	ProSitePatterns	Zinc finger C2H2 type domain signature.	138	159	IPR013087	-
	Lja5g2607	308	ProSiteProfiles	Zinc finger C2H2 type domain profile.	136	164	IPR013087	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja5g2607	91	206	C2H2 Transcription Factor Family	AT5G22990	40.945	1.56e-18	82.8

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Lja5g2607		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja5g2607	-		-	ccaj:109813600	114.39