Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2602 ATGGCGGTTCCGGGGAGGCGCAACGGCATGAACGAGGAAGACGAAGACGAAGAACCCATCGCCCTTTTCGAAGAAGAAGGTCTCATCGAAGATGATGAAGAAGCCGAAACGCCTCCTCATCTCCGTGCTCTCTCCCTCGCCGCTCAACGTGGCGACGTCAACGCTCTCCGCCTCGCTCTTGATAACTTGACTGGTAGTATTGATGAGCCAGTGGAGGATGGGGATTCAGCTCTCCATTTGACCTGTCTATATGGCCATTTGGAATGTGCCCAGCTGCTGATACAAAGAGGAGCGAACTTGGAGGCTCAGGATGAAGATGGCGCGATTCCTTTGCATGATGCTTGTGCAGGAGGATTTACGCAGATTGTTCAACTGATACTCAATAGTGCTAATGGCACAGAGCATATAAAAAGGATGCTTGAATCAATTGATTCTGAAGGTGATACTCCTCTTCATCATGCTGCCAGAGGTGAGCATGCTGATGTGATTAGGTTGTTGCTGTCTAATGGTGCTTCTACCACAAAGACAAACTTATATGGGAAGATCCCAGCAGAGTTACCTGATCATGGCACAGATGCTAAGTTGCTGCTGGAAGCAGCCGCTACACAAATGGCAAGCTAA 621 0.4928 MAVPGRRNGMNEEDEDEEPIALFEEEGLIEDDEEAETPPHLRALSLAAQRGDVNALRLALDNLTGSIDEPVEDGDSALHLTCLYGHLECAQLLIQRGANLEAQDEDGAIPLHDACAGGFTQIVQLILNSANGTEHIKRMLESIDSEGDTPLHHAARGEHADVIRLLLSNGASTTKTNLYGKIPAELPDHGTDAKLLLEAAATQMAS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2602 206 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 201 - -
Lja5g2602 206 PANTHER TANKYRASE-LIKE 1 201 - -
Lja5g2602 206 Gene3D - 108 202 IPR036770 -
Lja5g2602 206 Pfam Ankyrin repeats (3 copies) 106 176 IPR002110 GO:0005515
Lja5g2602 206 Pfam Ankyrin repeats (3 copies) 41 104 IPR002110 GO:0005515
Lja5g2602 206 ProSiteProfiles Ankyrin repeat region circular profile. 146 172 - -
Lja5g2602 206 SUPERFAMILY Ankyrin repeat 37 186 IPR036770 -
Lja5g2602 206 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Lja5g2602 206 ProSiteProfiles Ankyrin repeat profile. 146 178 IPR002110 GO:0005515
Lja5g2602 206 Gene3D - 11 107 IPR036770 -
Lja5g2602 206 ProSiteProfiles Ankyrin repeat region circular profile. 73 105 - -
Lja5g2602 206 SMART ANK_2a 39 69 IPR002110 GO:0005515
Lja5g2602 206 SMART ANK_2a 73 102 IPR002110 GO:0005515
Lja5g2602 206 SMART ANK_2a 146 175 IPR002110 GO:0005515
Lja5g2602 206 SMART ANK_2a 106 135 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2602 43 189 Ion Channels AT2G25600 28.655 2.74e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2602 - - gmx:100527544 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2602 5 51343903 51348048 Lja5g2602 5 51343903 51348048 ECH