Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2585 ATGGACACCGCCGCCGCCATACCAGAACCCGAAGCGGCGCCGCCGCCGCTGTACGATTCCGCAATCGACAGCCGCAAGGCGCGGCGCGGCGAGGTGGTGAACGGTTACGTCGTTTACACTCGGCGAGGTAAGAGGACTGTTCGTTCTGAGAATGAGGAAGCAGGTGGTAATGCAGCGGTGAAAGCGGAGGAAGGTGGTGGTTCCGGTGAGGCGGTGCTCAATGATCTGGTTTGCGGAAGGCTCAAGCGGCATCGGCGATCTACGTTTAAGAAGGCGGAGGCTGAGGCGGAGGTTGAGGCAGAAGCTGCTGCTGCTGCTGCTGATGGTGGTGATGGTGGCGGTGTGATTGCGAAGAGGGAGATGGAATTGAAGGTGTCGACTGTCAAGGAGCTTTTCGATACTGGCTTGCTCGATGGAGTTCCGGTTGTTTACGTGGGATGCAAGAAGGATTCAACATCAGGATTGCGGGGTGTAATTATCCACGGGGGTATATTGTGCTCGTGCTGTCTGTGCAATGGACGCAGAGTTATTCCACCTTCCCAATTCGAGATTCATGCTTGCAACACATATAAGAGAGCATCTCAGTATATTTGCTTTGAAAATGGAAAGAGCCTGCTTGAACTATTAGGAGTATGCAGAGCAGCTCCAGCACATGCTTTGGAGGTGACCATTCAAAATTTTGTTGGTTCGCCGCATGAAGAAAAGTATTTTACTTGCAGAAGTTGCAGAGGATGTTTCCCTTCTTCAACTGTGAAAAGAGTAGGGCCTATTTGCCATTCTTGCGTGGAGTCAAGGAAATCTGAAGACAATTCTATTCATGCAGTTGGTAAAAGAGTCAGGTCCCCTCGACCCATGCTGTTCTCCAGTCCATCCTGTTCTTCTGAACTATGTATCTCTTCACGAACTAAAAGAAACTGGAAGAAAAGAACAAAGTCATCGAAACGGGTTAGCAGCTCAAATTCTTCCAGTGGTGCTTCTGTGCCTATTTTATTCCAAAAGAAAAGGTCATCAGAACTGTCAGTTAAATTGAAGATTGCTCCAGGTACTTTGAATCCGGAGATCTTACCTCCACAAAATAAGAGCGAGTGGAGGATTGCTAAAAAGTATCAGAGAATGCATAAATTAATTTTTGAAGAAAATGGGTTACCGGATGGAGCTGAAGTAGCTTATTATGCACGTGGACAGAAATTTCTCGAGGGAATCAAAAGGCACTCTGGGATTCTTTGTCATTGCTGCAACACTGAGGTCAGCCCCTCACAGTTTGAGGTCCATGCAGGGTGGGCTTCTCGCCAAAAACCTTATACATACATCTACACGTCGGATGGGGTGTCTCTTCAAGACTTAGCAACACTTCTCTCTAAAGATCGCAAATACAATGCGAAGTATCATGATGATGCATGCAATGTTTGTTGGGATGATGGAAATCTGATGCATGGTGATGGAGGCCCAAGGGCATTTCAAAAAGCTGGAAGATCGGAAAGAGTTGTTCCTGTTGATCAGATTTCCAAGAGATGCATTCGCATAGTAAAAAGTATCGACTCTGAGATTGGTGGATGTGCATTATGCAGGGGTTCTGACTTCAGCAGATCAGGATTTGGTCCACGCACAATAATCATATGTGATCAGTGTGAAAAGGAATATCACGTCGGCTGTTTGAGGGATCATAAGATAGCATATTTAAAGGAATTGCCGGAAGGAAATTGGCTTTGTTGCAATGATTGCACAAGAATACATTCTCTTTTGGAGAACCTCCTGATTAGGGTGGCTGAGAGACTCCCTGAATCTCTTTTGGATGTCATAAAGAAAAAGCAAGAGGAAAGATGTTTAGAACCCCTCAGAGAGATTGATGTAAGATGGAGACTTCTTAATGGTAGAGTTGCTTCTCCTGAAACTAAGCCATTGCTTTTGGAGGCTGTTTCAATGTTTCATGAATGTTTTGATCCTATAGTGGATCCTGCTACTGGACGTGACCTTATCCCTGCAATGGTTAATGGAAGGAATTTGCGGACTCAGGATTTTGGAGGAATGTATTGTGCATTATTGATGGTCAATTCATCTGTGGCATCTGCGGCCATGCTTCGAATTTTCGGTGGCGATATTGCAGAACTCCCTTTAATTGCTACAAGAAATAAAAACCGTGGGAAGGGCTACTTCCAAACACTGTTCTCGTGTATTGAGAGACTGTTGTCTTTCTTGAGTGTGAAAAACCTTGTGCTACCAGCTGCTGAAGAAGCAGAATCTATATGGATTCATAAATTTGGGTTTAGCAAGATGGAACCTGACCAGCTCACCAACTATAGGAAGAACTACTGTCAGATGATGGCATTCAAAGGGACAGTTATGCTTCATAAAACGGTGCCTCAATGTCGGGTCACCAATACTCAATCATGA 2391 0.4538 MDTAAAIPEPEAAPPPLYDSAIDSRKARRGEVVNGYVVYTRRGKRTVRSENEEAGGNAAVKAEEGGGSGEAVLNDLVCGRLKRHRRSTFKKAEAEAEVEAEAAAAAADGGDGGGVIAKREMELKVSTVKELFDTGLLDGVPVVYVGCKKDSTSGLRGVIIHGGILCSCCLCNGRRVIPPSQFEIHACNTYKRASQYICFENGKSLLELLGVCRAAPAHALEVTIQNFVGSPHEEKYFTCRSCRGCFPSSTVKRVGPICHSCVESRKSEDNSIHAVGKRVRSPRPMLFSSPSCSSELCISSRTKRNWKKRTKSSKRVSSSNSSSGASVPILFQKKRSSELSVKLKIAPGTLNPEILPPQNKSEWRIAKKYQRMHKLIFEENGLPDGAEVAYYARGQKFLEGIKRHSGILCHCCNTEVSPSQFEVHAGWASRQKPYTYIYTSDGVSLQDLATLLSKDRKYNAKYHDDACNVCWDDGNLMHGDGGPRAFQKAGRSERVVPVDQISKRCIRIVKSIDSEIGGCALCRGSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKIAYLKELPEGNWLCCNDCTRIHSLLENLLIRVAERLPESLLDVIKKKQEERCLEPLREIDVRWRLLNGRVASPETKPLLLEAVSMFHECFDPIVDPATGRDLIPAMVNGRNLRTQDFGGMYCALLMVNSSVASAAMLRIFGGDIAELPLIATRNKNRGKGYFQTLFSCIERLLSFLSVKNLVLPAAEEAESIWIHKFGFSKMEPDQLTNYRKNYCQMMAFKGTVMLHKTVPQCRVTNTQS* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2585 796 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 65 497 - -
Lja5g2585 796 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 489 792 - -
Lja5g2585 796 MobiDBLite consensus disorder prediction 306 325 - -
Lja5g2585 796 SMART PHD_3 518 575 IPR001965 -
Lja5g2585 796 PANTHER AUTOIMMUNE REGULATOR 65 497 - -
Lja5g2585 796 PANTHER AUTOIMMUNE REGULATOR 489 792 - -
Lja5g2585 796 SUPERFAMILY FYVE/PHD zinc finger 511 572 IPR011011 -
Lja5g2585 796 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 674 760 IPR016181 -
Lja5g2585 796 MobiDBLite consensus disorder prediction 1 22 - -
Lja5g2585 796 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 517 577 IPR013083 -
Lja5g2585 796 Pfam Tify domain binding domain 157 209 IPR032308 -
Lja5g2585 796 Pfam Tify domain binding domain 404 449 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2585 Lja-Chr5 51054387 51063123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2585 127 793 PHD Transcription Factor Family AT2G36720 47.441 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2585 - - lja:Lj5g3v0681130.2 1557.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0784 1 7584357 7592826 Lja5g2585 5 51054387 51063123 PCT