Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2581 ATGAAATTGAAATCCTTCTTCTCCTCCCCCTGGTTTCTCCAAATTATACTGCTACTTCTGCAAACTAGTTTTGCAACAAGTAAAAGGACAAAATGTCTCCCTTCTCATTGCGGCAATATCACTAACATATTGTATCCATTTCGGCTGAAGGATGACCCTGCAACTTGTGGGCATCGGGAGTATGAATTAACTTGCCAAAACAACCAGACATTATTGCTACCTTTGTTTCCAGGCCAAAACTACCATGTGAAGGCAATCAACTACAACAATTTCACAGTCCGGCTCGTTGATCCCGCCATTCATGAGACTGATTGCTCCTCCATTCCTCGCTATTTCCTATCCGCCGCCAATTTCTCTGGTTCCTACGATGATAGATTCACCACTTATGACGGACCTGGCTATGGCAACTACGACGATGCAGAAACCGATGATGCCTTTCACATCCTACGAATGCTGCAGCACGTGATTTACATGAACTGTAGCAATCCAGTTAGGGATGATCCAGTGTATGTGGATACAGCAGCTCCCTGCAGCAGCAGCAACGTTGTTGTTAATTCGCATGATGATTCAAAAGGCCATGTTTATGCCATCGCTGGAGACTTGACGGCTGGGAGTTCAAAACCTTACTGCCATGTCAAGGTTGTTACTCCTGTATCCATTTTTGCTGACAATTCTTGTCCAACGCAGGTAGTGAAACCCAACCAAACATCTTCCTATGGTGAAATTCATAGGATGTTAGTCACTGGATTTGAGGTTTCATGGATGACTCGAATTTGTCAAGATCGTTGTGATAAGCCTGGTTGTTTTTTCAATTGCACCTCCCAGAAGCTCCAATGCAACAATTATCATGACTGTACAATTACTTTTGGGAGAAACCTCAACTCATATCTTACTAGGTTATTCTCCCCATGTCGTCTTGTCCTTCAAATACTCCATTTAGGTCTGTTCATCCTTTCAGCTGCGGGGTTTGTTTTGGCAACATTTATTGAAATAAGACTTATATTTGGTCTCATAATCCTCTTTGGAAAACTGATACATATATATTGGACAAGACATGCATCAGTTTATGAAAATATTGAGGATTTTCTTCAAGGGAACTCCCTCATGCCAATAAGGTACTCATACAAAGATATAAAGAAGATGACTAAAGGTTTTAAAGACAAGTTGGGTGAAGGAGGCTATGGTTCTGTTTATAAAGGAAAATTGCGTAGTGGAATTTTTGTAGGCGTAAAGATGTTGGGCAAACCTAAGGCTAATGGGCAAGAGTTCATTAGTGAAGTTGCAACCATAGGAAGGATACATCATGGCAATGTGGTTCAACTTATTGGATTTTGTGTTGAGGCATCTAAACGTGCTCTTGTTTATGAATTCATGCCTAAAGGATCTCTTGATAAGTATATTTCCTCCAAAGAAGATGACATCTCTCTAACTTATAATCAAATGTACAGAATATCTCTTGGGGTTGCTCGAGGTATTTCATATTTGCATGAAGGTTGTGACATGCAGATTCTACATTTTGATATCAAGCCTCACAACATCCTTCTTGATGAGAACTTTAACCCTAAGGTATCAGACTTCGGTCTGGCAAAACTTTACCCAATTAACAATAGCATTGTCAATTTGACTGCAGCGAGAGGAACAATTGGTTATATGGCTCCAGAATTGTTTTATCAAAATGTTGGAGGAGTGTCCTATAAGGCTGATGTATATAGCTTTGGAATGCTTTTGATGGAAATGGCAAATAGGAGAAGAAATTTGAATCCATATGCAGATAATTCAAGTGAAATTTTCCTCCCTTTTTGGATTTACGACCAATTGAAGGAAGAAAGGGAGATAGAAATTGGAGAAGTTACCCAGGAGGAAAAGAATAATGTCAAAAAGATGTTCATAGTTGCTTTATGGTGTATACAGTTGAGACCCAATGACCGTCCTTCAATGAACAAAGTAATAGAAATGCTTGAAGGAGATGTTGAAAGCATTATAATGCCTCCAAAGCCTTCTCTATACCCAACTGAAACTATTCAAGATCTTGAAAATAGTCCTGATAGTGATGCTTTTAGTTCAATGTAA 2070 0.3947 MKLKSFFSSPWFLQIILLLLQTSFATSKRTKCLPSHCGNITNILYPFRLKDDPATCGHREYELTCQNNQTLLLPLFPGQNYHVKAINYNNFTVRLVDPAIHETDCSSIPRYFLSAANFSGSYDDRFTTYDGPGYGNYDDAETDDAFHILRMLQHVIYMNCSNPVRDDPVYVDTAAPCSSSNVVVNSHDDSKGHVYAIAGDLTAGSSKPYCHVKVVTPVSIFADNSCPTQVVKPNQTSSYGEIHRMLVTGFEVSWMTRICQDRCDKPGCFFNCTSQKLQCNNYHDCTITFGRNLNSYLTRLFSPCRLVLQILHLGLFILSAAGFVLATFIEIRLIFGLIILFGKLIHIYWTRHASVYENIEDFLQGNSLMPIRYSYKDIKKMTKGFKDKLGEGGYGSVYKGKLRSGIFVGVKMLGKPKANGQEFISEVATIGRIHHGNVVQLIGFCVEASKRALVYEFMPKGSLDKYISSKEDDISLTYNQMYRISLGVARGISYLHEGCDMQILHFDIKPHNILLDENFNPKVSDFGLAKLYPINNSIVNLTAARGTIGYMAPELFYQNVGGVSYKADVYSFGMLLMEMANRRRNLNPYADNSSEIFLPFWIYDQLKEEREIEIGEVTQEEKNNVKKMFIVALWCIQLRPNDRPSMNKVIEMLEGDVESIIMPPKPSLYPTETIQDLENSPDSDAFSSM* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2581 689 ProSiteProfiles Protein kinase domain profile. 383 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2581 689 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 679 IPR045874 GO:0004672
Lja5g2581 689 Gene3D Transferase(Phosphotransferase) domain 1 458 661 - -
Lja5g2581 689 Gene3D Phosphorylase Kinase; domain 1 360 457 - -
Lja5g2581 689 SMART serkin_6 383 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2581 689 Pfam Wall-associated receptor kinase galacturonan-binding 32 97 IPR025287 GO:0030247
Lja5g2581 689 Pfam Protein kinase domain 386 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2581 689 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 14 679 - -
Lja5g2581 689 SUPERFAMILY Protein kinase-like (PK-like) 368 654 IPR011009 -
Lja5g2581 689 Coils Coil 603 623 - -
Lja5g2581 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2581 Lja-Chr5 50959624 50973358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2581 28 686 Receptor kinase-like Gene Family AT5G38260 34.795 3.85e-104 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lja5g2581 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2581 - - mtr:MTR_1g027050 776.163