Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2563 ATGGAACTCTCTCTGATCCGTCCTCCTATGCTTCTTCATTGCCCCCTCAACTCCATTCTCTTCTCAACAAGGACACACAACAAAACATCATACAGGTTACCATGCCGCTGCTCATGTTCTTCCTCTAATAAAACTGCTGCAGAACCAGTTACAGAGTCTTTACAGATTGAAGGAAGAAGAGAATTACTCAGTTGTCTCATCACAACTGTTGCTGGAGTCTTTGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTACGAGGAGCAAAAATTCCTGAAAGTGATTTCACAACCTTGCCCAATGGTCTGAAGTACTATGATTTGAAAGTTGGGAATGGAGCTGAGGCTGTAAAAGGATCGCGTGTCGCAGTTCATTATGTTGCTAAGTGGAGAGGTATCACCTTTATGACCAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCGTATGGATTTGATGTAGGCGAATCTGAGAGAGGAAATGTCCTCAAAGGGTTGGATTTAGGAGTGCAGGGCATGCGAGTAGGAGGCCAGCGATTGTTAATTGTTCCTCCTGAACTTGCGTACGGAAAGAAGGGAGTCCAAGAAATACCTCCAAATGCAACAATAGAGGTAGATATTGAACTGCTTTCCATCAAACAAAGTCCATTTGGGACTGCGGTAAAGATCGTCGAAGGTTGA 690 0.4507 MELSLIRPPMLLHCPLNSILFSTRTHNKTSYRLPCRCSCSSSNKTAAEPVTESLQIEGRRELLSCLITTVAGVFACDVAGAVSTSRRALRGAKIPESDFTTLPNGLKYYDLKVGNGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESERGNVLKGLDLGVQGMRVGGQRLLIVPPELAYGKKGVQEIPPNATIEVDIELLSIKQSPFGTAVKIVEG* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2563 229 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 21 229 - -
Lja5g2563 229 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 118 213 IPR001179 GO:0003755
Lja5g2563 229 Gene3D - 82 223 IPR046357 GO:0003755
Lja5g2563 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 21 229 - -
Lja5g2563 229 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 122 216 IPR001179 GO:0003755
Lja5g2563 229 SUPERFAMILY FKBP-like 94 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2563 Lja-Chr5 50538709 50543255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2563 111 215 Calmodulin-binding Proteins AT5G48570 30.909 1.68e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2563 - - gmx:100815603 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2563 5 50538709 50543255 Lja5g2563 5 50538709 50543255 ECH