Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2533 ATGGAAATGCCTGCTAGAAGGACCAATTACTCTCTCCTCAGCCAAGTTCCCGACGACCAGTTCACCGCCGCGCCGTCTTCCTCCGGCGACGGAAAACCCACCCGAACTGCCAGGTCCGATTGGGAGCTCGTCGCCGATCACAGGGCGGCTCAGCAGGCGAACAATCGGATCGGGAGCTTATTCTCTTTGAGCGGCTTGCAGAGGCAGTCTAGTGGGAGCAGCTTCGGTGAGAGCTCGCTTTCAGGCGGAGGAGAGTTCTACGCTCCGACGCTGGCGGCGAGTGAGGTGGATGGTGCGTTTGGGTATTTTCATGAGGAGGGGAGGAATAGGTTGGTGGAGGCTCCGGGGAGGGCTAGTGGGTCTTCTGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGTTACCAGCTGCAGCTTGCTCTTGCGTTGCGGTTATCGTCGGATGCTACGTGTGCTGATGACCCGAATTTCCTGGATCAGGCTCCTGATGAATCGTCCATGAGGCTCCCGTTGTCGCCCGAGGCGGTTTCGCATAGATTCTGGGTGAATGGCTGCCTATCATACTCCGACAAAATTCCTGATGGGTTTTACCTGATTCATGGGATGGATTCCTATGTCTGGACTGTGTGCACTGATCTGCAGGAAAATGGCCGAATCCCTTCAGTTGATACGCTTAAATCTGTAGATCCCTGCATCGATTCTTCACTTGAAGTAGTTTTGGTGGATCGACGCAGTGACCCCACCTTAAGAGAACTGCAAAACACAGTTCATAGCATTTCTTCTAGCAGCTTAACAACAGCAGAGGTTGTAGATCACCTCTCCAAACTGGTTTGCAATCGTATGGGGGGTTCTACTTCTGTTGGGGAAGATGACTTGGTTTCTATATGGAGGGATTGCAGTAACGATCTGAAAGATTGTTTAGGATCTGTTGTTGTTCCCATAGGTAGTCTATCTGTTGGCCTGTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCTGATGCCATTGGTTTACCTTGTCGGATCACTAGGGGCTGTAAATATTGCAAAAGGGTTGATGCTTCATCTTGTCTTGTTCGATTTGGCCTTGAGAGGGAATGTCTCGTTGATTTTATTGGGAAGCCAGGATACTTATGCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCCCCCCTGCGCTTTCCAAGACATAATCCAACTGAACCTACCATTGATTTCAGGTCACTGGCCAAACAATATTTCTTGGACTGTCTGTCCATTGAGCTTGTCTTTGACAGCAATTCTGCGGGCACACATGATCAAGGTCTTGAGACATATGTATCATGCAATCCTCCTCAGAACATTTTAGACTCAACAACAGTGGGCAAGTATCCACCGCCTTTAAAGCAGAAGCGTCCTGTTGGTATGCAAACCTCACCAGCACTAACTAATGCCAATGATGACATGATTGAGGGTAGGAGGTTTGTTGAAGGAAGTCTACTGAGACCTAGCAAACCTACTCGAGAAATTTCCCTTGACATGGATGATTTGGACATACCGTGGTGTGATCTTGTGTTAAAAGAGAAAATAGGATCAGGTTCTTTTGGAACTGTACACCGTGCTGAGTGGAATGGCTCGGATGTCGCCGTGAAAATTCTGATGGAACAAGATTTTCATGCTGAACGCTTCAAAGAATTCTTGAGGGAGGTTGCAATAATGAAACATTTGAGACATCCAAACATCGTTTTATTAATGGGAGCAGTCACTCAACCTCCTAACTTATCAATTGTCACTGAATATTTATCAAGGGGTAGCTTATATAGGCTGTTGCATCGACCTGGTGCCAGAGAGGTGTTGGATGAGAGGCGTAGGATTGCAATGGCTTATGATGTGGCAAAGGGGATGAATTATCTTCATAAACGTAATCCTCCCATTGTTCATAGAGATCTTAAATCTCCAAACCTTCTAGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGCTTAAAGGCCAATACATTTCTCTCCTCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAAGTTCTTCGTGATGAGCCATCGAATGAGAAGTCTGATGTTTACAGCTTTGGTATAATCTTGTGGGAGCTTGCAACGTTGCAACAGCCATGGGGCAATTTGAATCCAGCACAGGTCGTGGCAGCTGTTGGCTTTAAGGGAAAAAGGCTTGAGATCCCATGTGATGTGAATCCCCAATTAGCTGCAATGATTGAGGCTTGTTGGGCCAATGAGCCCTGGAAACGGCCTTCTTTCTCCAGTATTATGGATTCTTTGAGGACAATGCTTAAACCCCCTACTCCTCAACCTGGTCGTCCAAACATGCCATTACTCACCTGA 2388 0.4761 MEMPARRTNYSLLSQVPDDQFTAAPSSSGDGKPTRTARSDWELVADHRAAQQANNRIGSLFSLSGLQRQSSGSSFGESSLSGGGEFYAPTLAASEVDGAFGYFHEEGRNRLVEAPGRASGSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDQAPDESSMRLPLSPEAVSHRFWVNGCLSYSDKIPDGFYLIHGMDSYVWTVCTDLQENGRIPSVDTLKSVDPCIDSSLEVVLVDRRSDPTLRELQNTVHSISSSSLTTAEVVDHLSKLVCNRMGGSTSVGEDDLVSIWRDCSNDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADAIGLPCRITRGCKYCKRVDASSCLVRFGLERECLVDFIGKPGYLCEPDSLLNGPSSISFSSPLRFPRHNPTEPTIDFRSLAKQYFLDCLSIELVFDSNSAGTHDQGLETYVSCNPPQNILDSTTVGKYPPPLKQKRPVGMQTSPALTNANDDMIEGRRFVEGSLLRPSKPTREISLDMDDLDIPWCDLVLKEKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFLREVAIMKHLRHPNIVLLMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAREVLDERRRIAMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGIILWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPCDVNPQLAAMIEACWANEPWKRPSFSSIMDSLRTMLKPPTPQPGRPNMPLLT* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2533 795 CDD STKc_MAP3K-like 527 775 - -
Lja5g2533 795 MobiDBLite consensus disorder prediction 1 37 - -
Lja5g2533 795 ProSitePatterns Protein kinases ATP-binding region signature. 527 548 IPR017441 GO:0005524
Lja5g2533 795 PRINTS Tyrosine kinase catalytic domain signature 683 693 IPR001245 GO:0004672|GO:0006468
Lja5g2533 795 PRINTS Tyrosine kinase catalytic domain signature 636 654 IPR001245 GO:0004672|GO:0006468
Lja5g2533 795 PRINTS Tyrosine kinase catalytic domain signature 746 768 IPR001245 GO:0004672|GO:0006468
Lja5g2533 795 PRINTS Tyrosine kinase catalytic domain signature 595 608 IPR001245 GO:0004672|GO:0006468
Lja5g2533 795 PRINTS Tyrosine kinase catalytic domain signature 702 724 IPR001245 GO:0004672|GO:0006468
Lja5g2533 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Lja5g2533 795 Gene3D Phosphorylase Kinase; domain 1 514 599 - -
Lja5g2533 795 Gene3D Transferase(Phosphotransferase) domain 1 600 785 - -
Lja5g2533 795 MobiDBLite consensus disorder prediction 8 34 - -
Lja5g2533 795 Pfam Protein tyrosine and serine/threonine kinase 522 775 IPR001245 GO:0004672|GO:0006468
Lja5g2533 795 Pfam Ethylene-responsive protein kinase Le-CTR1 173 378 - -
Lja5g2533 795 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 13 791 - -
Lja5g2533 795 ProSiteProfiles Protein kinase domain profile. 521 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2533 795 PANTHER BNAA03G01030D PROTEIN 13 791 IPR028324 GO:0004672
Lja5g2533 795 MobiDBLite consensus disorder prediction 455 480 - -
Lja5g2533 795 SUPERFAMILY Protein kinase-like (PK-like) 501 774 IPR011009 -
Lja5g2533 795 SMART serkin_6 521 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2533 Lja-Chr5 49802657 49813588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2533 1 791 MAP Kinase Kinase Kinase AT5G03730 64.269 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lja5g2533 PK_Tyr_Ser-Thr 9.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2533 K14510 - gmx:100775768 1275.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2533 5 49802657 49813588 Lja5g2533 5 49802657 49813588 ECH
Lja1g0742 1 7181321 7200033 Lja5g2533 5 49802657 49813588 PCT