Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2526 ATGATAAGAGAAATCTGTGTCCCTGCAAGAACAACACGTGTCTGTGCCCCTCTCCTTTACTCTACACATCGATGTAATAATAACATGTTTGCAACTTGTTCAGCATCTTCTACAATTCCAAGAAGATCTTTATCTCTGTCACTCATCTCCACCACTTTCTCAGCATTCATCTTCTCACTTCCTCCTCCTCCTTCCTCTTCTTCTCCCATTTCTTCTAAATTCCCCATTTCAGAATTCTTTGAGCTCCCCAATTCCGGTGGCGTTAAGGCATTGGACCTCCTTGTTGGTTCAGGTGATGTTCCCGCAAATGGAGACCAGGTTGCAATTCATTACTATGGCCGGCTGGCAGCAAAACAAGGATGGCGTTTTGACTCAACCTATGACCACAAAGATGAGAATGGGGATCCTAATCCTTTTGTCTTTGTCCTTGGTGCTGGCAAGGTAATTGCTGGAATTGATTTTGCAGTGAGATCGATGAAAGTAGGTGGTATTCGTAGAGTCATCATACCTCCTTCCCTTGGCTACCAGAACACATCACAGGAGCCCATCCCACCTAATTTCTTTGACAGGCAGAGGCTGTTCACTACCATTTTTAATCCAACTCGGCTTGCAAATGGTGAAGGCTCAACTTTAGGGACACTTATTTTTGATATTGAACTGGTTAGCCTTAGGCACCAGTGA 681 0.4435 MIREICVPARTTRVCAPLLYSTHRCNNNMFATCSASSTIPRRSLSLSLISTTFSAFIFSLPPPPSSSSPISSKFPISEFFELPNSGGVKALDLLVGSGDVPANGDQVAIHYYGRLAAKQGWRFDSTYDHKDENGDPNPFVFVLGAGKVIAGIDFAVRSMKVGGIRRVIIPPSLGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVSLRHQ* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2526 226 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 104 224 IPR001179 GO:0003755
Lja5g2526 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 27 226 IPR044197 -
Lja5g2526 226 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 100 221 IPR001179 GO:0003755
Lja5g2526 226 SUPERFAMILY FKBP-like 85 224 - -
Lja5g2526 226 Gene3D - 77 223 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2526 Lja-Chr5 49680435 49685866 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2526 63 224 Calmodulin-binding Proteins AT5G48570 33.129 1.32e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2526 - - gmx:100808927 350.132