Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2505 ATGATGGAGTACTCACACAAGCAACTGTTCTCTCCATTCAGTCTTTCCCTTGCATTATTTGTACTTCTTCTCTCAGGGAAAATGGGGATCCAAGCTGAGGCTCGCGTGCACCGCCATCATCACTACGAAAAATTGTTCATTTTTGGGGACTCTTATGTTGACACCGGCAACTCGAGAAAAGATATTTCTAATTCCTGGAAAGTCCCTTATGGCATGACTTTTCCCCAAAAACCTGCCGGACGATGGTCCGACGGTCGAGTTCTAACTGATTACGTCGCCCAGTTTTTGGGACTGAAATCGCCACTCCCCTACGAGTTCAGGAAAGAGGCGCCACCTCAGTATTTGAAGTATGGGATGAACTTTGCCTATGGTGGTTCAGGAGTGTTTAAAACATTAGCTCCATACCCAAATATGACTACCCAGATCAATTTCTTAGAGCAACTCATTGAAGAAAAAGTGTTTACTCTCTCAGATCTCAGCAAATCTGTGGCCCTAGTCTCTGTTGCTGGAAATGACTACAGATATTACTTGGCTAATAATGGCACTGCCGAGGGTATTCCTTCCTTCATAGCCTCAGTGGTTAATCAAACCATCATCAATTTAATTCGCCTCCAAAAGTTAGGAGTGAAGAAAATTGTCGTGGATGCTCTTCAACCCCTTGGCTGCCTTCCCGAAGTAACTGTTGCAAACTCATTCCAGCATTGCAATAGCACTGCCAACAACCTCGCCGTTTTCAGCAACAACTTGTTGAACCAATCTGTGACCAAGTTGAATCAAGAAGCCAAGGACCACTCCACCTTTGTAATTCTTGATCTTTACAAGAGTTTCTTGTCAGTGCTTAACAACCCACCAGCTAGCAATACTACAAATCTGTTAAAGCTATGTTGTGCCGGAGTGAGCAGTGAATATTTTTGCTCGAATGTGGATGAGAACAACGTGAAGAAATATGTGGTTTGTGAAAATGTTCAAGCGGCTTTCTTTTGGGATACATTTCACCCAACACAAGCAGGTTGGAAGGCGGTGTATAACAATCTACAAACAAATGATCTTCGTCGACTTAAATACTAG 1068 0.4326 MMEYSHKQLFSPFSLSLALFVLLLSGKMGIQAEARVHRHHHYEKLFIFGDSYVDTGNSRKDISNSWKVPYGMTFPQKPAGRWSDGRVLTDYVAQFLGLKSPLPYEFRKEAPPQYLKYGMNFAYGGSGVFKTLAPYPNMTTQINFLEQLIEEKVFTLSDLSKSVALVSVAGNDYRYYLANNGTAEGIPSFIASVVNQTIINLIRLQKLGVKKIVVDALQPLGCLPEVTVANSFQHCNSTANNLAVFSNNLLNQSVTKLNQEAKDHSTFVILDLYKSFLSVLNNPPASNTTNLLKLCCAGVSSEYFCSNVDENNVKKYVVCENVQAAFFWDTFHPTQAGWKAVYNNLQTNDLRRLKY* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2505 355 Pfam GDSL-like Lipase/Acylhydrolase 45 343 IPR001087 GO:0016788
Lja5g2505 355 PANTHER OSJNBB0059K02.9 PROTEIN 3 354 - -
Lja5g2505 355 Gene3D SGNH hydrolase 30 348 IPR036514 -
Lja5g2505 355 SUPERFAMILY SGNH hydrolase 44 345 - -
Lja5g2505 355 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2505 Lja-Chr5 49254211 49256424 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2505 37 341 Pollen Coat Proteome AT1G75930 28.614 9.07e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2505 - - gmx:100789208 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0719 1 6888025 6893234 Lja5g2505 5 49254211 49256424 PCT