Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2471 ATGTTGGGGAAGAAAATGGTATCATTGAAGAAACTAGCCAAGAAGGTGAAAGCTGTTGGTGGAGCTGACTCTAACACTAACCCTCCCTATCATGAATGTCTTCTCAAGAGATATGAGGAAGAATCCCCCTCCAGCACAACCCCAACTGGTTTTTTCGCGCTTTATGTCGGCGAAGACCGCCAAAGATACGTGGTTCCAACCAGCTACCTTTCCCATCCTTTATTCAAGATCCTGCTGGAGAAGGCGTACAACGAATTTGGGTTCGCGCAGCGGAACGGCCTCGTAGTTCCGTGCAGTGTTTCCACATTTCATGAGGTGGTTAATGCTATCGAATGCAACAATGGGAAATTTGACTTAGGCAAGATTTTTGAAGATTTTGATTGA 384 0.4557 MLGKKMVSLKKLAKKVKAVGGADSNTNPPYHECLLKRYEEESPSSTTPTGFFALYVGEDRQRYVVPTSYLSHPLFKILLEKAYNEFGFAQRNGLVVPCSVSTFHEVVNAIECNNGKFDLGKIFEDFD* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2471 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 126 - -
Lja5g2471 127 Pfam Auxin responsive protein 26 109 IPR003676 GO:0009733
Lja5g2471 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 126 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2471 Lja-Chr5 48505933 48506316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2471 43 113 Calmodulin-binding Proteins AT5G20810 50.704 8.05e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2471 K14488 - gmx:100790208 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2471 5 48505933 48506316 Lja5g2471 5 48505933 48506316 ECH