Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2429 ATGGCACAACCCCAACTCAACGGCGCCTACTACGGCCCCTCCATTCCGCCGCCGCAACAGAAATCCCACCACCGCCCAACCCACAACGACAACGGCGGAGGCGGCTGCGGCCTCTGCTCCTGCTTCTGCGGCTGCTTCCGCTGCTGCTGCGGCTGCATCGCCAACTGCATCCTCGGCCTCATCTGCAAGATCCTCACCACCATCATCATCATCGCCGCCGTCGCCGGCTTCCTCTTCTGGCTAATCGTCCGCCCCAACGTCGTCAAATTCCGCGTCACCGAAGCCTCACTCACTGAATTCACCTACACCAACAACACTCTCCACTACAATCTCGCCCTCAACATCACCGTCCGAAACCCTAACAGCAGAGTCGGCCTCTACTACGACTCCATCGAAACGACGGCGTTTTACCACGACGCGCGATTCGCTTCACAAAACCTCGGGAACTTCTTCCAACACAAAAAGAACACCACCGTGCTCAGCCCTGTGTTCAAGGGTCAGCAAGTGGTGCCGTTCAGCGAGGAACAGGGGAAGAAGCTGAATGAGGATCAGGGATCTGAGATTTACCGCATCAATGTGAAGCTGTTGCTGAAAGTTAGATTCAAATTGGGTTTGTTCAAGACTGGGAAGGTTACTCCCAAGGTTCGTTGTGAGTTGCATGTGCCTCTGAAATCACGGAATGGAACCGTTTCTGGGGCTGGATTTCAGGCTACTGGCTGCGAATGGTGGATACATTAG 738 0.5528 MAQPQLNGAYYGPSIPPPQQKSHHRPTHNDNGGGGCGLCSCFCGCFRCCCGCIANCILGLICKILTTIIIIAAVAGFLFWLIVRPNVVKFRVTEASLTEFTYTNNTLHYNLALNITVRNPNSRVGLYYDSIETTAFYHDARFASQNLGNFFQHKKNTTVLSPVFKGQQVVPFSEEQGKKLNEDQGSEIYRINVKLLLKVRFKLGLFKTGKVTPKVRCELHVPLKSRNGTVSGAGFQATGCEWWIH* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2429 245 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 25 243 - -
Lja5g2429 245 Pfam Late embryogenesis abundant protein 114 217 IPR004864 -
Lja5g2429 245 PANTHER OS05G0367900 PROTEIN 25 243 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2429 Lja-Chr5 46532818 46533935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2429 82 223 SNARE and Associated Proteins AT1G32270 39.161 1.85e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2429 - - aprc:113873272 269.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0651 1 6057429 6058478 Lja5g2429 5 46532818 46533935 PCT