LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja5g2426	ATGACTGACAAGGAGCCACCACCGCCACAACTGAACCCCGCCGCCGCAATAAACATCCCTCCCCCGGCGGAGCAACCACAACCCCGCCACCACAAAGGCAGAACATGCTGCTACTGCCTCTTCCGCACCTTCTGGATCCTCCTCGCCACCATCCTCCTCTTAGCCTGCCTCATAATCCTCGTGGTATGGATCCTCATCCAACCCCGTTCCTACACCTTCCACGCCTCCCAAGCCAAGCTCACCGAGTTCAACTACAACTCCACCACCGCCACGCTCCGCCACAACCTCGTCGTCAACTACACCGTCCGCAACCCGAACAAGAAGCTCAAGATATACTTCGACGTCGTGGTGGCTCACGCGCTCTACAAGGATGTTACGTTCGCCACGACGGACGTCACCATGCCGTGGCGCGCGTCTTATCTTCAAGCCACGAAGAGCACAGTTCCCATGAGCGCTGCTTTCTCCGGGCAGCAAGTGGTGGCGGTGGATCATCAAGATTACATCTCTGATCAGTTCGAGAAAGAGAAAAAAGATGGAGCTTTTGTTATTGATACCAAGATCAACATCGATATTCGGTTCAGGTTGGGAGATTTCCAGTTTGAGGGTCCTAGTGCCAGAGTCAAATGTAAGCTCAAGGTTCCTCCGAGCTCTAATGGTGATGGGAAAACGGTTGCGGTCGTTGCAGATGCTTTTCATCCCACCAAGTGCGATGTTGATTTCTGA	723	0.5394	MTDKEPPPPQLNPAAAINIPPPAEQPQPRHHKGRTCCYCLFRTFWILLATILLLACLIILVVWILIQPRSYTFHASQAKLTEFNYNSTTATLRHNLVVNYTVRNPNKKLKIYFDVVVAHALYKDVTFATTDVTMPWRASYLQATKSTVPMSAAFSGQQVVAVDHQDYISDQFEKEKKDGAFVIDTKINIDIRFRLGDFQFEGPSARVKCKLKVPPSSNGDGKTVAVVADAFHPTKCDVDF*	241

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja5g2426	240	PANTHER	OS05G0367900 PROTEIN	30	239	IPR044839	GO:0098542
	Lja5g2426	240	MobiDBLite	consensus disorder prediction	1	26	-	-
	Lja5g2426	240	MobiDBLite	consensus disorder prediction	1	29	-	-
	Lja5g2426	240	PANTHER	PROTEIN, PUTATIVE-RELATED	30	239	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja5g2426	Lja-Chr5	46445580	46447268	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja5g2426	65	221	SNARE and Associated Proteins	AT1G32270	26.875	6.64e-10	56.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja5g2426	-		-	lja:Lj5g3v0827670.1	432.18

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja1g0650	1	6051276	6052384	Lja5g2426	5	46445580	46447268	PCT