LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja5g2423	ATGGCCGATGATAAGCACCTAAACGGTGCCTACTACGGCCCCTCCATCCCTCCGCCGGAGCAGCAACGTCCCCGCCGTCACCGCGGCAGAAACTGCTGCAGCTGCTTCTTCAGCTTCCTCTGGAAGGCTCTCCTCGCAATCATCCTCTTCCTCGCCCTCGTATTCCTCATCTTCTACCTCATTGTCCAACCACGCGCCTTCAAGTTCCATGTCACCGACGCCAAACTCACACAGTTCAACTACACCACCACCAACAACAACAACAGCAACAACCACCTCCTTCGCTACAACCTTGTCCTCAACTTCACCGCCCGCAACCCGAACAAAAAGCTCAACATCTACTACGACGAGGTGGAGGCCGTCGCGTTCTACGACGGCATCCCGTTCGGTTCGACCGACGTGATCACGTGGCGGAACTCGTTCCGGCAGTACAAGAAGAGCACCGACCGCATGAGCGGCGTTTTGAGCGGCGAACATGCGGTGGTGCTCGACCGTGATCAGGTGGTGGATTTTGAGAGGGATATGAGGGATAGTGTTTTTGACATCGATGTGAAGCTCCATATCAGGATGAGGTTCAGGCTTGGAGATTCTATAGGTGGTACTACTAAGGTCAAGGTTAAGTGTGAGCTTGAGGTTCCTTTTAGTTCTAATAATCATGGGAAATCGGTGACTCATGTGTTCCTGCCCACTGAGTGTGATGTCAATTTCTGA	711	0.5316	MADDKHLNGAYYGPSIPPPEQQRPRRHRGRNCCSCFFSFLWKALLAIILFLALVFLIFYLIVQPRAFKFHVTDAKLTQFNYTTTNNNNSNNHLLRYNLVLNFTARNPNKKLNIYYDEVEAVAFYDGIPFGSTDVITWRNSFRQYKKSTDRMSGVLSGEHAVVLDRDQVVDFERDMRDSVFDIDVKLHIRMRFRLGDSIGGTTKVKVKCELEVPFSSNNHGKSVTHVFLPTECDVNF*	237

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja5g2423	236	Pfam	Late embryogenesis abundant protein	102	209	IPR004864	-
	Lja5g2423	236	PANTHER	OS05G0367900 PROTEIN	25	234	IPR044839	GO:0098542
	Lja5g2423	236	MobiDBLite	consensus disorder prediction	1	26	-	-
	Lja5g2423	236	PANTHER	PROTEIN, PUTATIVE-RELATED	25	234	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja5g2423	Lja-Chr5	46414398	46416346	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja5g2423	61	220	SNARE and Associated Proteins	AT1G32270	31.288	4.23e-15	71.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja5g2423	-		-	lja:Lj5g3v0839880.1	417.157

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja5g2423	5	46414398	46416346	Lja5g2423	5	46414398	46416346	ECH