Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2315 ATGCTTTCAACTACTACTTGCTCCCTGCCTGCTACCACTTTCTTAGTGCTGCTGCTGACCATCCTTTTTCCTTCAAATGGCCAACTGAATTCAACCTTCTATTCTAGCACATGCCCAAATGTATCATTTATTGTGAGCAATGCTGTTCAGCAAGCTTTGCAATCTGATTCCCGTATTGGTGCAAGCCTTATTCGTCTCCACTTCCATGATTGCTTTGTCAATGGCGGTGATGCTTCCATTTTATTAGACCAGGGTGGGAACATCACACAGAGTGAAAAAAATGCAGCTCCCAACTTCAATTCTATTCGGGGCTTTGATGTAGTTGACACCATCAAAAGCGCCCTTGAAAATTCATGCCCCGGCATTGTGTCTTGTGCTGATATTCTTGCCCTTGCAGCTGAATCCTCAGTGTCCATGTCTGGGGGCCCTTCATGGAACGTGCCACTTGGAAGAAGGGATGGTCTTACAGCGAACCAAGCTGGTGCTAACAGCTCTATTCCCAGTCCATTTGAGAGCCTAGCCAACATCACATCCAAATTCTCTGCTGTTAACCTAGACACAACTGATCTTGTTGCATTATCAGGTGCACACACTTTCGGTCGAGCTCAATGCCAATTTTTCTCCCAAAGGCTATTCAACTTCAGCGGCACAGGCAACCCCGACCCTACCCTGAACTCAACCTATTTAGCAACTCTTCAGCAAAACTGCCCCCAAAATGGCAACGGCTCCACCTTGAACAACCTCGACCCTTCGTCCGCCAACGCATTCGATAACAACTACTTCACCAATCTTCTCACCAACCAGGGTCTTCTCCAAACGGACCAGGAGCTATTCTCCACAAATGGCTCTGCCACTATCTCCATTGTTAACAGCTTTGCAAATAACCAAACGGCGTTCTTCGAAGCCTTCGCGAAGTCGATGGTTAATATGGGTAATATCAGTCCCTTAACGGGGACTCAGGGTGAAATTAGAAATGATTGTAAGAAAGTTAATGGAAGTTGA 1002 0.4631 MLSTTTCSLPATTFLVLLLTILFPSNGQLNSTFYSSTCPNVSFIVSNAVQQALQSDSRIGASLIRLHFHDCFVNGGDASILLDQGGNITQSEKNAAPNFNSIRGFDVVDTIKSALENSCPGIVSCADILALAAESSVSMSGGPSWNVPLGRRDGLTANQAGANSSIPSPFESLANITSKFSAVNLDTTDLVALSGAHTFGRAQCQFFSQRLFNFSGTGNPDPTLNSTYLATLQQNCPQNGNGSTLNNLDPSSANAFDNNYFTNLLTNQGLLQTDQELFSTNGSATISIVNSFANNQTAFFEAFAKSMVNMGNISPLTGTQGEIRNDCKKVNGS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2315 333 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Lja5g2315 333 PANTHER PEROXIDASE 12 332 - -
Lja5g2315 333 CDD secretory_peroxidase 28 330 IPR033905 GO:0004601|GO:0042744
Lja5g2315 333 Pfam Peroxidase 46 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lja5g2315 333 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 SUPERFAMILY Heme-dependent peroxidases 28 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 PANTHER PEROXIDASE 72-RELATED 12 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g2315 333 Gene3D Peroxidase, domain 2 167 310 - -
Lja5g2315 333 Gene3D - 33 331 - -
Lja5g2315 333 ProSiteProfiles Plant heme peroxidase family profile. 28 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2315 Lja-Chr5 41998843 42002397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2315 13 333 Peroxidase AT5G06720 74.143 1.85e-172 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2315 K00430 - gmx:100811249 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2315 5 41998843 42002397 Lja5g2315 5 41998843 42002397 ECH
Lja1g1212 1 12512940 12514834 Lja5g2315 5 41998843 42002397 PCT