Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2288 ATGGCTGAATCAGCGACGAACGGGCAGAGCAACGACGGAGCACAGGGAAACGAAGAACAAGATGATGACTACATGGCTGATCTCTCTCTCTTTCTTCCTTCCGAAGCTCTTCACCCTCCGAAATCTTCATCCCAAATGGTTCCTAACAAGAATGATCCTTTAGTCAACTCTTCAAAGAGCAAGTTGAAAACTCTTAATTGGCAAGAACATAGAAAGCTTGAAAGAGAACGAAAGCAACAAGTGGAGGATGAACAAACAATAGCGAAAGTGGAAGCTCCAATACCACAATCAAACATTGGGTTTAAAATGCTCAAACAGATGGGTTATACTCCAGGTTCTGCCCTCGGCAAGCAAGGCTCGGGCAGGGCTGAACCAGTGGGGATTGAAATTCGACGGTCACGAGCAGGTATAGGGTTAGAAGATCCCCACAAGGAGAAGAGAAAAAAGGAAGAAATCATGTATGAAAAAAAAAGGAGGAACGAGCAGGACTTAATGGAAGAATTTGGGACAAGGCTGAAGTCAAGATGGCAGAGTAGGAGAATTATAGTTAATTTCAACAAGGCAAAGGCTGCCCTTGACCAATTGGAGAATAGGGAAGTTGAGGAGCCACCAAAGAATGAGGATGATGCAGAGGGTGAAGAAGAAGAAGAGGAAGAAATAACAGAAGAGGGCTTGCACGATGTTTTGATGAAACTGAGGGATGAGTTTGACTATTGCCTCTTTTGTGGATGCAAATATGAATCAAGGGATGCCCTTTTGTCCAACTGCCCCGGAACTGATGAAGATGACCACTAA 795 0.4428 MAESATNGQSNDGAQGNEEQDDDYMADLSLFLPSEALHPPKSSSQMVPNKNDPLVNSSKSKLKTLNWQEHRKLERERKQQVEDEQTIAKVEAPIPQSNIGFKMLKQMGYTPGSALGKQGSGRAEPVGIEIRRSRAGIGLEDPHKEKRKKEEIMYEKKRRNEQDLMEEFGTRLKSRWQSRRIIVNFNKAKAALDQLENREVEEPPKNEDDAEGEEEEEEEITEEGLHDVLMKLRDEFDYCLFCGCKYESRDALLSNCPGTDEDDH* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2288 264 MobiDBLite consensus disorder prediction 64 85 - -
Lja5g2288 264 MobiDBLite consensus disorder prediction 1 15 - -
Lja5g2288 264 Coils Coil 147 167 - -
Lja5g2288 264 MobiDBLite consensus disorder prediction 38 63 - -
Lja5g2288 264 Pfam Domain of unknown function (DUF4187) 213 264 IPR025239 -
Lja5g2288 264 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 20 264 - -
Lja5g2288 264 MobiDBLite consensus disorder prediction 193 225 - -
Lja5g2288 264 SMART G-patch_5 94 140 IPR000467 GO:0003676
Lja5g2288 264 MobiDBLite consensus disorder prediction 1 86 - -
Lja5g2288 264 ProSiteProfiles G-patch domain profile. 96 142 IPR000467 GO:0003676
Lja5g2288 264 SMART DUF4187_2 210 264 IPR025239 -
Lja5g2288 264 Pfam G-patch domain 96 139 IPR000467 GO:0003676
Lja5g2288 264 PANTHER UNCHARACTERIZED 20 264 IPR039249 -
Lja5g2288 264 MobiDBLite consensus disorder prediction 206 223 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2288 88 138 C2H2 Transcription Factor Family AT5G26610 43.137 1.07e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2288 - - gmx:100777380 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2288 5 40768511 40771069 Lja5g2288 5 40768511 40771069 ECH