Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2276 ATGTCTGAAATTCAAGACTACATTCAACTTTTCATGATTTTGCTACTCTCCACCATTGCAGTTCTAGCAATACTCACTAGAAACCAGAACAAGAATCATCGTCCACCCAGCCCTCCAGCACTCCCTATCATTGGACACCTTCACCTCATTTCTCGTTTACCTCACCAAAGTTTTCACTATCTCTCATCTTGCTACGGACCGATCATGCAGCTTTTCCTAGGCTCAGTCCCTTGTGTCGTGGTTTCCACCCCAGAAGCCGCCAAGGAGTTCCTCAAAACCCACGACACTTCCTTCTCTAACCGGTTCGTAAGTGCTGCGGTTCACTACCTCTCATACGGCTCAAACGGTTTCTTGTTTGCGCCTTACGGAGAATCCTGGAAGCTCATGAAGAAACTCTGCATGTCTGAGCTTCTCGGTGGCAGAACACTCGATCACTTTCTTCCCTTGAGGCAACAAGAGACTCTCAGGTTTCTCAAACTACTTAGAATCAAAGGTGAAGCTGGTGAAGTTGTTGATGTTGGTGCTGAGCTATTGACTCTCACCAATAGTATTATAACAAGAATGACTATGGGCAGAACGTGCTGTGAAAATGATAGTGAGGTGGAGGACATTAGGAAGATGGTGGTGGACACTGTGGAGCTGGTAGGGAGGTTTAATGTGTCTGACTGTGTTTGGTTTTGCAGGTATTTGGGTTTGCGGAAAATGGACAAGAGGGTGAAAGAGATTCATGACAGGTTTGACAGCATTATGGAGAGGGTGATATCGGAGCATGAAGCAGCGAGGAAGAAAATCATGGAAAGAGGTGAAAGTGCTCAAAATAGGGATTTGCTTGATATTTTGTTGAAAATACATCATGGAGATGAGAGCACTGAAGTAAAATTGACCATAGAAAATATCAAGGCTTTCATTTTGGACATATTTATGGCAGGAACAGACACAACTTCTATAACCATGGAATGGGCTCTGGCTGAGCTAATCAACCACCCAGATGTGATGGAGAAAGCACGACACGAGATCGATTCAGTGACCGGTAATCGCAGGTTAATAGAGGAGTCAGATCTTCCCAACCTTCCTTACTTGCGAGCTATTGTTAAAGAAACACTGAGGCTTCACCCTGCTGCTGCAACTTTTTTTAGGGAATCATCTGAAAGTTGTAATGTTAATGGCTACGAGATTCCTGCAAAGTCCTTGTTATTTATCAATTTGTGGTCCATGGCTAGGGACCCCAACCTGTGGGAGGACCCACTTGAGTTCAGGCCAGAGAGGTTTATGGGTGTAGAGAACCAATTAGATGTGAGGGGGCAGAATTTCAAGCTAATTCCATTTGGCTCTGGAAGAAGGGTGTGTCCTGGAATCTCACTAGCACTTGTGGTTGTACCTACCAATCTTGGTGCCATGATTCAGTGTTTTGAATGGAAGGTAAGTGGGACTGTTAGCATGGAAGAGAAACCATCAATTACCCTTCCAAGGGCTCATCCTTTGATTTGTGTCCCTGTGCCTCGCTTTTCTGGTGAAAATGCATATATATGA 1530 0.4464 MSEIQDYIQLFMILLLSTIAVLAILTRNQNKNHRPPSPPALPIIGHLHLISRLPHQSFHYLSSCYGPIMQLFLGSVPCVVVSTPEAAKEFLKTHDTSFSNRFVSAAVHYLSYGSNGFLFAPYGESWKLMKKLCMSELLGGRTLDHFLPLRQQETLRFLKLLRIKGEAGEVVDVGAELLTLTNSIITRMTMGRTCCENDSEVEDIRKMVVDTVELVGRFNVSDCVWFCRYLGLRKMDKRVKEIHDRFDSIMERVISEHEAARKKIMERGESAQNRDLLDILLKIHHGDESTEVKLTIENIKAFILDIFMAGTDTTSITMEWALAELINHPDVMEKARHEIDSVTGNRRLIEESDLPNLPYLRAIVKETLRLHPAAATFFRESSESCNVNGYEIPAKSLLFINLWSMARDPNLWEDPLEFRPERFMGVENQLDVRGQNFKLIPFGSGRRVCPGISLALVVVPTNLGAMIQCFEWKVSGTVSMEEKPSITLPRAHPLICVPVPRFSGENAYI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2276 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Lja5g2276 509 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 Gene3D Cytochrome P450 20 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 503 - -
Lja5g2276 509 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 503 - -
Lja5g2276 509 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2276 509 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2276 Lja-Chr5 39778648 39780666 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2276 1 501 Cytochrome P450 AT5G06900 47.714 1.48e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2276 K24188 - gmx:100805931 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2276 5 39778648 39780666 Lja5g2276 5 39778648 39780666 ECH