Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2274 ATGGCTAATTTTTGTGACTATTTGGTGCTACTAATAGTTGGCCTAGCCTCAATTCTCTTATTACGATTTCTCTTCACCAAGTCTTGCATCAAACAATGCCTTCCACCAAGCCCTATTGCCTTACCAATCATCGGACACCTCTACCTCCTCAGAAACCTCCCTCATCAAGCCTTCTACAACATATCATCTCGCTATGGCCCTTTGGTCTACCTCTTGTTCGGTTCCAAACCTTGTGTTCTTGTTTCCTCGCCTGAAATGGCAAAACAAGTCCTCAAAACCCACGAATTCTGTTTCTTAAATCGGCCAAAGAGAACCAATTTGGACTACATCACATACGGTTCTGCGGATTTCGTCTTGGCGCCGTACGGACCTTATTGGAGGTTCATGAAAAAGCTCTGCATGACTGAGCTCCTCGGAGGCCGAATTCTTCAGCAGCACCTTCCTATTAGAGCTGAAGAATTCAAACTTTTCTTGAAGGGTTTGAGGGAAAAGGTTAATGTGAAAGTGAATATAGGGGATGAGCTATCGATGCTTGCCAATAACATAATCACAAGGATGGCTTTGAGAAGAAGGTGTTGGGATGTTGAAGGGGAAGGGCACCAGCTGATTGAAGTGGTTAGGGAGATGACTGAGCTAGGGGGGAAGTTTAACTTGGGAGACATGTTGTGGTTTGTGAAGAAGTTTGATTTGCAAGGATTTGGTAAAAGGCTCAAGAGTGTTAGAAGTAGGTATGATGCTATCATGGAGAAGATCATAAAAGAGCATGAAGATGCAAGGAGGAAGAGGAAGGAGGATGAAGGAGTGAGGGATTTACTTGATATTTTACTTGATATTTATGCTGATGAAAGTTCAGATATTAGATTAACCAGAGAAAATATCAAGGCCTTCATTATGAACATGATTGGTGCTGGAACTGAGACATCAGCTTGCACAATAGAATGGGCTATGGCTGAGTTAGTCAACAATCGAGAAGTGATGGCAAGAGCAAGGCAAGAGATTGATTCACTGGTTGGTAAGGGAAGATTGGTGGAGGAATCAGATATTCCCAATCTGCCTTATGTTCAATCTATAATAAAAGAAACAATGAGGCTTCACCCCACTGGGCCCTTAATAGTGAGACAATCAACTGGAGATTGCAATATTAATGGGTATGACATTCCAGGAAGAACCACTGTGTTTGTGAATGTTTGGGCTATTGGTAGGGACCAAAACATCTGGGAGAACCCACTTGAGTTCAGGCCAGAGAGGTTCCTTAATGAAGAGGGACAGAGCCCTCTGGATCTTAAGGGGCAAAATTTTGAACTATTGAGTTTTGGTGCTGGAAGAAGAAGCTGCCCTGGTGCTTCACTTGCTTTGCAGATTATTCCTACAACACTGGCTGGGATGATTCATTGTTTTGAATGGAAGGTTGGTGAAGATGGCACTGGAACAGTTGACATGGATGAGGGGCCTGGAATGGCCCTTCCAAGGGCACATACCCTGCATTGCATCCCTGTGGTTAGGGTTCATACTTCTGCTCTTGTCTGA 1527 0.4375 MANFCDYLVLLIVGLASILLLRFLFTKSCIKQCLPPSPIALPIIGHLYLLRNLPHQAFYNISSRYGPLVYLLFGSKPCVLVSSPEMAKQVLKTHEFCFLNRPKRTNLDYITYGSADFVLAPYGPYWRFMKKLCMTELLGGRILQQHLPIRAEEFKLFLKGLREKVNVKVNIGDELSMLANNIITRMALRRRCWDVEGEGHQLIEVVREMTELGGKFNLGDMLWFVKKFDLQGFGKRLKSVRSRYDAIMEKIIKEHEDARRKRKEDEGVRDLLDILLDIYADESSDIRLTRENIKAFIMNMIGAGTETSACTIEWAMAELVNNREVMARARQEIDSLVGKGRLVEESDIPNLPYVQSIIKETMRLHPTGPLIVRQSTGDCNINGYDIPGRTTVFVNVWAIGRDQNIWENPLEFRPERFLNEEGQSPLDLKGQNFELLSFGAGRRSCPGASLALQIIPTTLAGMIHCFEWKVGEDGTGTVDMDEGPGMALPRAHTLHCIPVVRVHTSALV* 509
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2274 508 Pfam Cytochrome P450 35 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Lja5g2274 508 Gene3D Cytochrome P450 29 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 503 - -
Lja5g2274 508 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g2274 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 503 - -
Lja5g2274 508 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lja5g2274 Lja-Chr5 39741541 39743714 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2274 1 507 Cytochrome P450 AT5G06900 49.706 0.0 526
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2274 K24188 - gmx:100807524 807.749
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2274 5 39741541 39743714 Lja5g2274 5 39741541 39743714 ECH