Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2270 ATGCTTCTCCACATTTTCACTCTTCTCTATATCTCTCTTCCATTTATTTCCACTCTCAACTCCGACGGTCTCTCACTTCTAGCTCTAAAAGCCGCCGTGGAATCCGACCCCACCGGAGTCCTCCACTCGTGGTCCGACTCAGTCCCCACGCCGTGCAGCTGGACCGGAGTCTCCTGCTCCGGCGACCGAGTCACTCAACTCGCTCTCCCTTCCAAGAATCTCACCGGTTACATACCCTCTGAACTCGGCCACCTCACTTCGCTTCAACGACTCACTCTCTCTCACAACAACTTCACCAGAAACATCCCTTCAACCCTCTTCAACGACACCACAAACCTCGTCGTTTTGGACCTCTCTCACAACTCCCTCACCGGAACTCTACCTCCGTCAATCACCGCGCTCAAGAGGCTTACCCATTTGGATTTGTCTTCCAATTTGTTAACTGGGTCTCTCCCTGATTCGTTCTCCGAGCTCACCGGCCTCGCCGGGACGTTGAATCTTTCGCATAATCGATTCTCCGGCGGGGTTCCGCCGTCGCTTGGGAGTATTCCGGTCGCCGTGAGTTTGGATCTCCGGGATAATGAGCTCACCGGGAAGATTCCTCAGGTGGGGTCGCTTCTCAATCAGGGACCCACCGCTTTCTCCGGGAACATCGGACTCTGCGGGTTTCCGTTGCGGGATCCGTGCCCGGAAGCGGAAAAGGGGCCGGAGATTTTCCCCGGCGAAGACCCGGAAAATCCGAACCCGGGTCAGAATTCGGGTCGAACCGGTTTGGTGAGAGAAGAGAAGGGGTACGGGTCGTTGGTTCTTGCGGCGGTTGTCACCGGCGTGGCGGTGATGGGGGTGGTGGTTTTGCTCTCGGCGTGGATGCTGCGGCGGCGGCGGAGGTTGAGTGTTGGAGAGAGGGAGGGGAAGGGGAAGGTGGAGGGCGGTGAGGTTGGTGGGGTAGGGGAGGGGCAGAAGGGGAAATTCGTGGTGGTGGATGAAGGGTTTGGGTTGGAGTTGGAGGATTTGTTGAGGGCTTCGGCGTATGTGGTGGGGAAGAGCAGGAGTGGGATTGTGTACAAGGTAGTTGGCGTCGGGAAAGGGTCGATTCCGGCGGCGACAGCGGTGGCTGTGCGGCGGCTGAGTGAGGGTGATGATGATGCCACGGCGTTGAAGTTTAAGGAGTTTGAGTATGAGGTGGAGGCTATTGGGAGGTTGCGCCACCCCAATGTTGTTCCTTTGAGAGCCTATTACTATGCCAGTGATGAGAAACTCCTCATTACTGATTTCATCCGCAATGGAAGCTTGCATTCTGCATTGCATGGTGGAGCTTCCAATTCATTACCACCATTACCATGGGCAGCAAGGTTAAAAATTGCTCAAGGAGCTGCAAGGGGCTTGATGTACATACACGAATTTAGCGGTAGGAAGTACGTCCATGGCAACTTAAAATCTTCAAAAATCCTAATAGATGATGATTTCCATCCTTACATATCTGGTTTTGGACTTACTCGTCTTGGTTTGGGTACCCTAAAGTCTACCACTACATTCACACACAAGCGGCAAAACTCAAACCAGTCCATTGCAACCTCTGCAATAGGTTCAAAACTTGCAGCTTCCTCTAAAAGCTACTTGGCACCTGAGGCGCGCATAGCTGGCACAAAGTTCTCTCAGAAATGCGATGTCTATTCTTTTGGGATAGTTCTGTTAGAGCTTTTGACCGGTCGAGTGCCGGATCCTGGACCTGAAAATGATCAAAAGGAGCTAGAGAGTTTTGTGAGGAAAGCATTCAGAGAGGAGCTGCCATTGTCGGAGATTATAGACCCAGCTCTTCTGCCCGAGGTTAATGCTAAGAAGCAAGTTATTGCATCGTTTCATGTTGCCCTGAACTGCACAGAACTTGACCCAGAACTGCGACCAAGAATGAGAACCGTGTCTGAGACCCTTGATCACATCAAAATATAG 1950 0.5262 MLLHIFTLLYISLPFISTLNSDGLSLLALKAAVESDPTGVLHSWSDSVPTPCSWTGVSCSGDRVTQLALPSKNLTGYIPSELGHLTSLQRLTLSHNNFTRNIPSTLFNDTTNLVVLDLSHNSLTGTLPPSITALKRLTHLDLSSNLLTGSLPDSFSELTGLAGTLNLSHNRFSGGVPPSLGSIPVAVSLDLRDNELTGKIPQVGSLLNQGPTAFSGNIGLCGFPLRDPCPEAEKGPEIFPGEDPENPNPGQNSGRTGLVREEKGYGSLVLAAVVTGVAVMGVVVLLSAWMLRRRRRLSVGEREGKGKVEGGEVGGVGEGQKGKFVVVDEGFGLELEDLLRASAYVVGKSRSGIVYKVVGVGKGSIPAATAVAVRRLSEGDDDATALKFKEFEYEVEAIGRLRHPNVVPLRAYYYASDEKLLITDFIRNGSLHSALHGGASNSLPPLPWAARLKIAQGAARGLMYIHEFSGRKYVHGNLKSSKILIDDDFHPYISGFGLTRLGLGTLKSTTTFTHKRQNSNQSIATSAIGSKLAASSKSYLAPEARIAGTKFSQKCDVYSFGIVLLELLTGRVPDPGPENDQKELESFVRKAFREELPLSEIIDPALLPEVNAKKQVIASFHVALNCTELDPELRPRMRTVSETLDHIKI* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2270 649 Pfam Protein tyrosine and serine/threonine kinase 347 643 IPR001245 GO:0004672|GO:0006468
Lja5g2270 649 Pfam Leucine rich repeat 87 147 IPR001611 GO:0005515
Lja5g2270 649 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 648 - -
Lja5g2270 649 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 648 - -
Lja5g2270 649 MobiDBLite consensus disorder prediction 231 258 - -
Lja5g2270 649 SMART LRR_typ_2 85 109 IPR003591 -
Lja5g2270 649 SMART LRR_typ_2 134 157 IPR003591 -
Lja5g2270 649 ProSiteProfiles Protein kinase domain profile. 340 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2270 649 Gene3D Ribonuclease Inhibitor 71 232 IPR032675 -
Lja5g2270 649 Gene3D Ribonuclease Inhibitor 15 70 IPR032675 -
Lja5g2270 649 Gene3D Phosphorylase Kinase; domain 1 333 425 - -
Lja5g2270 649 SUPERFAMILY Protein kinase-like (PK-like) 345 644 IPR011009 -
Lja5g2270 649 Pfam Leucine rich repeat N-terminal domain 20 60 IPR013210 -
Lja5g2270 649 SUPERFAMILY L domain-like 21 226 - -
Lja5g2270 649 Gene3D Transferase(Phosphotransferase) domain 1 426 649 - -
Lja5g2270 649 PRINTS Leucine-rich repeat signature 113 126 - -
Lja5g2270 649 PRINTS Leucine-rich repeat signature 134 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2270 Lja-Chr5 39521528 39525423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2270 19 648 Receptor kinase-like Gene Family AT3G57830 56.279 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja5g2270 PK_Tyr_Ser-Thr 2.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2270 - - gmx:100796011 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2270 5 39521528 39525423 Lja5g2270 5 39521528 39525423 ECH