Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2251 ATGGGTAAGAAGAAGAGAGTTAGGGTTTCCGATGATGAGGAAGAAACCGAATCTGAACTCAACCCTTCCAACAATCACAACGAAAATTCCCTCTATCAGGTTCTTGGTGTGGAGAGCACAGCTTCACAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAGGCTGCATCCGGATAAGAATCCTGGTGATGAGGAAGCTAAGGCCAAGTTTCAGCAATTGCAAAATGTTATCTCGATACTTGGGGATGAGGAAAAACGGGCCATTTATGATCAGACTGGATCTGTTGATGATGCGGACCTTGCAGGGGATGTTGTTCAGAATCTTCGAGAATATTTCAGAACAATGTACAAGAAGGTCACTGAAGCGGATATTGAGGAGTTTCAAGCGAACTATAGGGGATCTGAATCTGAGAAGAAGGATTTGATTGACCTGTACAAGAAGTGCAAGGGTAACATGAACAGGCTATTTTCTTCAATGCTTTGTTCGGATCCTAAACTTGACTCACACCGATACAAGGATATTCTTGATGAGGCTATAGCTGCTGGAGAACTAAAGGAGAAAAAAGCCTACAAGAAATGGGCAAAGAAAATATCAGAAATCAAACCACCTACTAGTCCATTGAGGCCAAGGGCAGAATCGAAAAAGCAACCAGGAACGGACTTGTACGCTATGATATCACAGCGACAACATGAGCGGAAAAACCGGTTAGATTCTATGTTCTCATCTCTAATTTCAAAATATGGTGGACGTCAAATGCCAGAACCCTCTGAAGAGGAATTTGAAGCTACACAGAGAAAGCTTGAAAGCCGAATGTCCTCAAAAAAGTCAAGGCCCTCTGAAGAGGATTTTGAAGCTACACAGAGAAAGCTTGAAAGCCGAAGGTCCTCAAAAAAGTCAAAACTAAAGTAA 915 0.4219 MGKKKRVRVSDDEEETESELNPSNNHNENSLYQVLGVESTASQQEIKKAYYKLALRLHPDKNPGDEEAKAKFQQLQNVISILGDEEKRAIYDQTGSVDDADLAGDVVQNLREYFRTMYKKVTEADIEEFQANYRGSESEKKDLIDLYKKCKGNMNRLFSSMLCSDPKLDSHRYKDILDEAIAAGELKEKKAYKKWAKKISEIKPPTSPLRPRAESKKQPGTDLYAMISQRQHERKNRLDSMFSSLISKYGGRQMPEPSEEEFEATQRKLESRMSSKKSRPSEEDFEATQRKLESRRSSKKSKLK* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2251 304 Gene3D DnaJ domain 14 121 IPR036869 -
Lja5g2251 304 MobiDBLite consensus disorder prediction 1 30 - -
Lja5g2251 304 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 279 IPR042977 -
Lja5g2251 304 MobiDBLite consensus disorder prediction 246 304 - -
Lja5g2251 304 Pfam DnaJ domain 31 92 IPR001623 -
Lja5g2251 304 PRINTS DnaJ domain signature 32 50 IPR001623 -
Lja5g2251 304 PRINTS DnaJ domain signature 87 106 IPR001623 -
Lja5g2251 304 PRINTS DnaJ domain signature 50 65 IPR001623 -
Lja5g2251 304 PRINTS DnaJ domain signature 67 87 IPR001623 -
Lja5g2251 304 SMART dnaj_3 29 87 IPR001623 -
Lja5g2251 304 MobiDBLite consensus disorder prediction 254 294 - -
Lja5g2251 304 SUPERFAMILY Chaperone J-domain 27 103 IPR036869 -
Lja5g2251 304 ProSiteProfiles dnaJ domain profile. 30 95 IPR001623 -
Lja5g2251 304 Coils Coil 119 146 - -
Lja5g2251 304 MobiDBLite consensus disorder prediction 202 222 - -
Lja5g2251 304 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 279 304 IPR042977 -
Lja5g2251 304 CDD DnaJ 32 84 IPR001623 -
Lja5g2251 304 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 279 304 - -
Lja5g2251 304 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2251 Lja-Chr5 38661521 38664030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2251 32 92 C2H2 Transcription Factor Family AT1G74250 40.909 2.62e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2251 K09529 - gmx:100781463 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2251 5 38661521 38664030 Lja5g2251 5 38661521 38664030 ECH
Lja1g1262 1 12997411 13000370 Lja5g2251 5 38661521 38664030 PCT