Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2231 ATGGAGAGAAGTTCACTTTCTGTAGTGAGAGGATTGCTTAGAACGGATGGTATCCCTGGCTTGTATAAAGGGTTTGGAACAGTCACTACTGGTACAATTCTTACTAGAATCATATCCCTCACTGCCTTCGAGTCCACAAAGGCCGCTTCCTTCAGGATACTTGAGCCATTTAGACTATCTGAAATATCCCAGGATGCCATAGCATACGGAGTTGCGGGCATGACATCATCACTTTTAGCTCATGCTGTGTCGCTTCCATTTGATGTGGTTAGCCAAAAGTTGATAGTGCAAGGATACTCAGGTCCTGCCCAGTATAGTGGGGGTTTGGATGTTGCTCGCAAGGTGTTAAGGTCTGAGGGCATCAGAGGATTAAATAGAGGGTTTAGTCTCTCTGTTATGACTTATTCGTCATTTCGTGCTGTATGGTGGGCAAGTTATGGCTCAAGTCAGCGCTGGTTATGGAGATTCTTGGGAGATGGCGGCAACAATGAGAAAGATACTCCTAGTGTGCCGAAGATTATGTTTGTTCAGGCGGCTGGAGGGATTATTGCGGGTGCTACTGCAACCTGTATTACAACCCCATTGGATACTATGAAGACACGGTTACAGGTACTTGATCAAAGAAGATATGGTTGGAAAGGTTTATTTAGAGGATTAGTTCCAAGATTTTTCAGCTTGTCAGCACGGGGTACTGCACTGATATTGGCCTATGAAACTATGAAGAAAGATGGAGAAGAGAGAGATATACCTTATTTATTTAAAAATACTTTTATTTTATTTCTGGTGCATTTCTTGCGGTTTTTGACACATTTCTGA 816 0.4289 MERSSLSVVRGLLRTDGIPGLYKGFGTVTTGTILTRIISLTAFESTKAASFRILEPFRLSEISQDAIAYGVAGMTSSLLAHAVSLPFDVVSQKLIVQGYSGPAQYSGGLDVARKVLRSEGIRGLNRGFSLSVMTYSSFRAVWWASYGSSQRWLWRFLGDGGNNEKDTPSVPKIMFVQAAGGIIAGATATCITTPLDTMKTRLQVLDQRRYGWKGLFRGLVPRFFSLSARGTALILAYETMKKDGEERDIPYLFKNTFILFLVHFLRFLTHF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2231 271 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 49 IPR018108 -
Lja5g2231 271 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 1 242 - -
Lja5g2231 271 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 242 - -
Lja5g2231 271 Pfam Mitochondrial carrier protein 67 154 IPR018108 -
Lja5g2231 271 Pfam Mitochondrial carrier protein 6 48 IPR018108 -
Lja5g2231 271 Pfam Mitochondrial carrier protein 175 205 IPR018108 -
Lja5g2231 271 SUPERFAMILY Mitochondrial carrier 3 239 IPR023395 -
Lja5g2231 271 Gene3D Mitochondrial carrier domain 1 249 IPR023395 -
Lja5g2231 271 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 243 IPR018108 -
Lja5g2231 271 ProSiteProfiles Solute carrier (Solcar) repeat profile. 64 152 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2231 Lja-Chr5 37751158 37758117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2231 2 242 Chloroplast and Mitochondria Gene Families AT5G15640 59.922 3.26e-104 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2231 K15121 - gmx:100819519 334.724