Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2193 ATGGCAAAGGGGAAGAGATTTTTTGGATGGGTGAAAAGACTATTCGTTTCTGAGTCAAAGGAAAAAAAGCCAAAGAAATGGGGATGGATATGGAGCATTGGAAGGATTAAACAGAGGAAATACCCTTCAATTACAGCTCCAAACAGGACATTGATTGAAGCAAGTGCAGAGCAAAGAAAACATGCTTTGACTGTGGCTATTGCAACAGCAGCAGCTGCAGAAGCTGCAGTTGCCGCCGCGCATGCTGCCGCTGAGGTTGTCAAGCTCACCAGCGCTGCTTCTCGTTCGTATTCATATCTATGCAATGGCGACCGGAGTTTGGCCGCCATCAAGATTCAAAGCACATACCGTGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTATAAGACTCCAAGCCATAGTTCGTGGTCAAGCTGTGAGACGTCAAGTGTCCTGCATTTTGGAGAATTTTACCTCCAATGCAAGAACTCAGGTGGAAATCCAGCAAATCAAGTTGTTTCTAAACCAAAAGAAAGAAGAGAAAGAACTGAAGCAAGAATGTCATGGTCATAGAACTTGGAATTTCAGCTCGCACTCAAGAGAAGACATTGAAGCCATATGGTTAAGAAAGCAAGAGGCCATTGTAAAAAGAGAGCGCATGAGGCAATACTCTTCTTCACAAAGGGAGAGAAATATTTCCCACAAGATGGAAGATTCTACGTCCCATAAGGAATTTGGAAAAGATAGCTTTCGCCCGCTAGGAGAGTGGATACATAAAGAAACATGTGATTGGGATATGCTTTATAAATCAGCTTTTCCTTCAAATATTACGATAATAAAGAATGAATTGCAAGAAGGATTTAGAACACAAACCTCAATCCCACGGAAATCATTTTCTCATGTGAAAAGAAGTTCACTAGGGGATGAAAGTTCCATGCCAAATTCACCAGTTTTTCCAAAATACATGGCTGTCACTGAATCCAGCAAAGCAAAAGTGAGATCTATGAGCACACCAAAGCAAAGAACAGCATTTCTAGATATATGCTCCAATCAAATTGAGAACAGTGCAGCAAATAGCAATTATTTTCATCAGAAGATGTAG 1092 0.413 MAKGKRFFGWVKRLFVSESKEKKPKKWGWIWSIGRIKQRKYPSITAPNRTLIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTSAASRSYSYLCNGDRSLAAIKIQSTYRAHLARKALRALKGVIRLQAIVRGQAVRRQVSCILENFTSNARTQVEIQQIKLFLNQKKEEKELKQECHGHRTWNFSSHSREDIEAIWLRKQEAIVKRERMRQYSSSQRERNISHKMEDSTSHKEFGKDSFRPLGEWIHKETCDWDMLYKSAFPSNITIIKNELQEGFRTQTSIPRKSFSHVKRSSLGDESSMPNSPVFPKYMAVTESSKAKVRSMSTPKQRTAFLDICSNQIENSAANSNYFHQKM* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2193 363 Gene3D - 104 154 - -
Lja5g2193 363 ProSiteProfiles IQ motif profile. 105 133 IPR000048 GO:0005515
Lja5g2193 363 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Lja5g2193 363 Pfam Protein of unknown function (DUF4005) 300 339 IPR025064 -
Lja5g2193 363 MobiDBLite consensus disorder prediction 217 241 - -
Lja5g2193 363 PANTHER IQ-DOMAIN 12 1 355 - -
Lja5g2193 363 Pfam IQ calmodulin-binding motif 108 126 IPR000048 GO:0005515
Lja5g2193 363 PANTHER IQ-DOMAIN 5-RELATED 1 355 - -
Lja5g2193 363 SMART iq_5 104 126 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2193 Lja-Chr5 35855065 35858554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2193 1 343 IQD Protein Family AT5G03960 44.504 3.97e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2193 - - gmx:100800767 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2193 5 35855065 35858554 Lja5g2193 5 35855065 35858554 ECH