Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2171 ATGGACACTTCTGAACAACTCGATTGGGAGGCTTTCCTGGAATTCGAAGTCGATGATTTTTTCATGGACGCTCCTCCTCCTTCTCTCGCCGTCGGTTCCTCGCCGGATCCCGTTCTGTCGGAGATCGAGAATCTGCTTATGGACGACGAACCCGCTGTCCTTCCGTCGGAGTCCGAAGACTACGACAAGCTTCTGGCGGAGATTCTAGCCGAGCCGCACCCTCACTCCGACAATAGCAGAGTCGAGCCACCAACTCCAGAAGAGGCTTCCAATGAAACCGTCTCCAAGAAGCAAATTAGGCAAATGAGGAATAGGGATTCTGCTGTGAAATCAAGAGAGAGGAAGAAGCTGTATGTGAAAAACCTTGAGATGAAGAGTAGGTATTATGAAGGGGAATGCAGAAGACTGGCTCATTTGCTCCAGTGCTGCTATGCTGAGAATAGCGCGTTGCGGCTTTGTTTGCAATCGCGTGGCGCATTTGGTGCTTCCATGACCATGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGCTGGGTTCCCTGCTGTGGTTCATGGGCACCATGTGCCAACTCAGTCTACCCCTGATACTGTGGTTAACAGTGGTACTTCTAAGAGAAAACATGGAACAGAAAGACCTAAGAAGGGTGGCTCGAAAAGGGCCAGGAAGTAAGATCTCTGAGTATTTCCTGATGGAATCGTTTGTTAGGAGTAGAAGATGCCGAGCTTCAAGAACCAAGATGAAATTTGATTTTTTTAATGTTCTATAA 771 0.4877 MDTSEQLDWEAFLEFEVDDFFMDAPPPSLAVGSSPDPVLSEIENLLMDDEPAVLPSESEDYDKLLAEILAEPHPHSDNSRVEPPTPEEASNETVSKKQIRQMRNRDSAVKSRERKKLYVKNLEMKSRYYEGECRRLAHLLQCCYAENSALRLCLQSRGAFGASMTMQESAVLLLESLLLGSLLWFMGTMCQLSLPLILWLTVVLLRENMEQKDLRRVARKGPGSKISEYFLMESFVRSRRCRASRTKMKFDFFNVL* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2171 256 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 100 114 IPR004827 GO:0003700|GO:0006355
Lja5g2171 256 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 5 253 - -
Lja5g2171 256 PANTHER BZIP TRANSCRIPTION FACTOR 60 5 253 - -
Lja5g2171 256 SMART brlzneu 92 156 IPR004827 GO:0003700|GO:0006355
Lja5g2171 256 MobiDBLite consensus disorder prediction 72 105 - -
Lja5g2171 256 MobiDBLite consensus disorder prediction 83 97 - -
Lja5g2171 256 CDD bZIP_HY5-like 97 147 - -
Lja5g2171 256 Pfam bZIP transcription factor 95 139 IPR004827 GO:0003700|GO:0006355
Lja5g2171 256 Gene3D - 95 156 - -
Lja5g2171 256 SUPERFAMILY Leucine zipper domain 96 152 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2171 20 255 bZIP Transcription Factor Family AT1G42990 32.624 6.84e-18 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lja5g2171 bZIP_1 1.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2171 - - lja:Lj0g3v0350599.1 279.641