Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2156 ATGGCTCATAAAAGAGCATGCTATTGCCTCATGATGTTCTTTATGTTGGTTAATTTTTTTGTGCCATCATCGGGAGAAACAACTGGTCAAATTTTGATGAGGTTCAGAAACTCATTGTCCAATAATAATGCTTTAAATAACTGGGGTAATGAGTCTAAGTTGTGCAACTGGGCTGGTTTGTTATGCACCAACCAGAAATTTTCTGGCTTAAGATTAGAGAATATGGGACTAGGTGGGAAGGTTGATGTAGACACCTTGTTTGAACTCTCAAATTTGATGAGTTTTAGTGTCATGAACAATAATTTTGAGGGTCCAATTCCTGAATTCAAAAAACTTGTGGGGCTAAGGGGATTGTTTCTGTCCAATAACAAATACTCAGGTGAAATTCCAGATGATGCTTTTGAGGGCATGAATCTTAAAAGGGTATTCATGGCAGAAAATGGGTTCACAGGTCAGATTCCAATGTCCCTTGCTGTCTTGCCTAGACTTTTAGATTTGGACTTGCATGGGAATAGTTTTGGAGGCAACATACCAGAGTTTCAAGTAAAGGATTTCAGAGTATTTAACTTATCAAACAACCAATTGGAGGGTGCAATACCCGAAAGCGTTAGCAATGAAGATCCGAACTCATTTTCTGGAAACCAAGGTCTTTGTGGAAAACCTGTGAGAAACCCCTGCAATAAGACCCCCAACAAATCTGAGGTGCCTCCCAACCCTGCTGCCTCTTCACATAAAGAAAAGGCAAAGAAGCACCAAATCTTTATACCTGTTATAGTAGTGGTGTCAGTGGTTATCTTGGCTTCAGTTGCAGCCCTTCATTTTCTCCACAGCCACCGGAGAAAAAGCCGGGATCCCCTATTAGGCCATCAGCTAAATTCCCAGGACAGTGGAGGTTTCAAGGAGGCAGTATCCATTGATCTGACGCATGATTTCAAGAATGGTGGTGACCAGGGAGAGTTGAACTTTGTTAGGGAAGAAAAAGGGTGTTTTGATCTGCAAGACCTTCTTAGGGCCTCAGCTGAGGTTCTTGGAAGTGGAAGTTTTGGTTCCACCTACAAGGCTATGGTTTTGAATGGACCAACTGTGGTAGTAAAGAGATTTAGGCACATGAACAAAGTTTGGAAAGAGTTCTGTGAGCACATGCAAAAGCTTGGAAGTTTGAAACATCCTAATGTGCTCCCTCTTGTTGCATTCTACTACAGGAAAGAAGAGAAGTTTTTGGTTTATGACTATGGTGAAAATGGAAGCTTGGCCAGTCATCTACATGGTAGAAATGGTTCTATGCTAAATTGGCCAACTCGTTTGAAAATCATAAAAGGAGTAGCCAGGGGCTTAGCATATCTCTACAAAGAGTTCCCCGGACAAAACCTCCCTCATGGTCATCTCAAATCCTCCAATGTGATGCTAGACCACTCATTTGAGCCACAATTGACAGAGTATGGACTTGTACCAGTGATGAACAGAAGCCATGCTCAGCAGTTCATGGCAGCCTACAAGGCTCCAGAGGGGAACCAACCCAATGAGAAAACAGATGTTTGGTGTCTTGGGATCCTCATCCTGGAACTCCTGACAGGTAGGTTCCCAGCAAACTATGTAAGACATGGGAGGGGAGCAAATGCAGATTTGGCAACATGGGTGGACTCAGTTGTGAGGGAAGAGTGGACAGGTGAGGTTTTTGATAAGGACATCTTGGGTGCCAGGAATGGTGAGGGTGAGATGCTGAAGCTGTTGAGGATTGGGATGTATTGCTGTGAATGGAGTGTGGAGAGCAGGTGGGATTGGAGGGAAGCAGTGGCAAGGATTGCGGAGCTTAAGGAGAAGGATAGTGAAGATGAATACTCTTCATATGTTAGTGAAGGAGAACTGTACTCAAAGACTATGACAGATGATGATGACTTCTCTTTCTCTGTCACTGACTCACATCAGTTTGGAACTCCAGCTGGGTAG 1947 0.434 MAHKRACYCLMMFFMLVNFFVPSSGETTGQILMRFRNSLSNNNALNNWGNESKLCNWAGLLCTNQKFSGLRLENMGLGGKVDVDTLFELSNLMSFSVMNNNFEGPIPEFKKLVGLRGLFLSNNKYSGEIPDDAFEGMNLKRVFMAENGFTGQIPMSLAVLPRLLDLDLHGNSFGGNIPEFQVKDFRVFNLSNNQLEGAIPESVSNEDPNSFSGNQGLCGKPVRNPCNKTPNKSEVPPNPAASSHKEKAKKHQIFIPVIVVVSVVILASVAALHFLHSHRRKSRDPLLGHQLNSQDSGGFKEAVSIDLTHDFKNGGDQGELNFVREEKGCFDLQDLLRASAEVLGSGSFGSTYKAMVLNGPTVVVKRFRHMNKVWKEFCEHMQKLGSLKHPNVLPLVAFYYRKEEKFLVYDYGENGSLASHLHGRNGSMLNWPTRLKIIKGVARGLAYLYKEFPGQNLPHGHLKSSNVMLDHSFEPQLTEYGLVPVMNRSHAQQFMAAYKAPEGNQPNEKTDVWCLGILILELLTGRFPANYVRHGRGANADLATWVDSVVREEWTGEVFDKDILGARNGEGEMLKLLRIGMYCCEWSVESRWDWREAVARIAELKEKDSEDEYSSYVSEGELYSKTMTDDDDFSFSVTDSHQFGTPAG* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2156 648 Gene3D Phosphorylase Kinase; domain 1 309 411 - -
Lja5g2156 648 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Lja5g2156 648 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 614 - -
Lja5g2156 648 PANTHER LRR RECEPTOR-LIKE KINASE 8 614 - -
Lja5g2156 648 MobiDBLite consensus disorder prediction 199 245 - -
Lja5g2156 648 ProSiteProfiles Protein kinase domain profile. 337 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2156 648 SUPERFAMILY L domain-like 45 205 - -
Lja5g2156 648 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Lja5g2156 648 Gene3D Ribonuclease Inhibitor 184 228 IPR032675 -
Lja5g2156 648 Gene3D Transferase(Phosphotransferase) domain 1 413 625 - -
Lja5g2156 648 MobiDBLite consensus disorder prediction 199 217 - -
Lja5g2156 648 Pfam Leucine rich repeat N-terminal domain 29 62 IPR013210 -
Lja5g2156 648 SUPERFAMILY Protein kinase-like (PK-like) 341 601 IPR011009 -
Lja5g2156 648 Pfam Protein kinase domain 340 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2156 Lja-Chr5 32729968 32734625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2156 7 630 Receptor kinase-like Gene Family AT4G31250 44.006 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja5g2156 Pkinase 3.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2156 - - gmx:100781593 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2156 5 32729968 32734625 Lja5g2156 5 32729968 32734625 ECH