Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2151 ATGTGGTTACAAAAGAGTCAAGGGGATAGGAAGGATGGGGTAAATGGAATAGTGGCAGTGGCAATAGATCATGATAAAGGTAGTCAAAATGCACTCAAATGGGCCATTGAGCATCTCCTCACAAAAGGTGGAACTGTAGTTCTCATCCATGTCAAGCATAAGCCATCTTCTTTTTCAACATCAGCTTCTCTTTCAACCCCAAGGGCAGGGATACATGGCATTGCTGAGCATTCATTGGTTTGCCACGACCCGGATGAGCACACCAAAGAAATTTTTCGGCCGTATCGTGTCTTTTGTGCACGGAAAGATATACACTGCAAGGATGTTGTACTCGAAGAAGTAGATGTATCTAAAGCACTAATTGAATATGTTACCCAGTCATCAATTGAGCATTTAGTTATAGGATCTTCACACAAAACTGGATTTCTTAGATTCAAGGTAGCAGATATTCCAGGAAATGTTGCAAAAGGGGCTCCAGATTTTTGTACAGTTTATGTTGTTGCTAAAGGAAAAATCCAAACAATGCGATCTGCTTCTCGTCCAGCTCCTTCCTTTACACCTCTACAAACCCAAATCAATCAAGCCTCTACTAAGTCAACCCAATCAGACCCACGTGTGCATTTGACTAATAGTGTGAAAGGACTTGAGAGGAGATCGGTTGATGCACCAGTTAAATTACAGGATGGCACAGAATCTTTCAGGTCACCATTCAATAGGAAAGGTATGCATGATAAGTCATACGGAGAAATTTCATTGTCGGATACTGACATAACCTTTGTAAGCTCAGGAAGGTCAAGTACAGACCGCATGTTCCCTTCCATTCATATCCACTCAGATACAAGCATGTCCAATCCTCGCTTATCATATAGCTCTGACATAGATCCAAATCATAGCTTTGAGTCAATGCATTGTGGAAGGACATCTATGGATATCAACTCTTCTGAATTCTCATCCTTCTCCCACGATAGTGATGGGTTATCATCTTCTAATTCATCGTCCATGGATGAAGTGGAAGCCGAAATGAGGAGACTCAAGTTGGAACTCAAACAAACAATGGAAATGTATAGCACTGCCTGTAAAGAAGCACTAACTGCCCAACAAAAGGCTGTAGAACTGCAACGCTGGAAGATAGAGGAAGAGAGGAGGTTGGAGGAGGCAAGGCTAGCTGAAGAAGCTGCAATGGCAATTGCAGAAAAAGAGAAAGCTAAGTCTAAAGCAGCCATTGAGGCAGCCGAAGCACAAAAACGGATTGCAGAACTAGAAGCGCAAAAAAGAATTAATGCTGAAATGAAAGCACTTAGAGAAGCAGAGGAGAAACGAAAAGCAGTTGATGCTTTGTCAAATAGAGATGTCAGGTACAGAAGATATGCAATTGAGGAGATTGAAGCTGCGACTAATTTTTTTACAGAGTCTCTAAAGATTGGAGAAGGGGGTTATGGTCCAGTTTACAAGTGCCTTCTTGATCATACCCCTGTCGCGGTGAAGGTTCTACGTCCCGATGCAGCACAAGGAAGGTCGCAATTTCAACGAGAGGTTGAGGTATTAAGTTGCATTCGACACCCAAACATGGTTCTCCTCCTAGGAGCTTGCCCAGAGTACGGATGCCTTGTCTATGAGTACATGGCAAATGGAAGCTTAGATGATCGCCTCTTTTGTAGAGGAAACACTCCCCCAATTCCTTGGCAGTTTAGGTTCAAAATTGCAGCTGAAATCGGCACTGGCTTGCTATTCCTGCACCAGACAAAACCAGAGCCTCTAGTTCATAGAGACCTTAAACCAGCCAACATTTTGCTTGATCGCAACTATGTGGCCAAGATTAGTGATGTAGGTTTGGCTAGGCTAGTGCCACCGTCTGTGGCAGAAAATGTGACACAATATCGCATGACATCAACTGCCGGAACATTCTGCTACATAGATCCTGAGTACCAGCAGACAGGAATGCTCGGGGTAAAATCTGACATATACTCTCTTGGGGTAATTTTATTGCAAATATTGACAGCAAGACCTCCAATGGGTTTGACACATCATGTTGATAGAGCCATTGAGAAAGGAACATTTATTGACATGTTGGATCAAAATTTGCAAGATTGGCCAGTAGAGGATGCCTTGAGCCTTGCAAAGATGGCAATCAGATGTGCCGAGTTAAGGCGTAAAGACAGGCCAGATCTTGGTAAGGAAGTTCTACCAGAACTAGAAAGGCTAAAAGCACTTGCTGAAAATAGTGATCAACATATGATGCTGGGTGGCTACATTAGCCCATCCAATCATAGCCAAGTTTCTCTTCATTTGGATGGATCTTGTTCCCCTCTTCCTTATTCTGGGGAAAGCTCAAGAAATCCTTCAAGCCCTTGA 2352 0.4307 MWLQKSQGDRKDGVNGIVAVAIDHDKGSQNALKWAIEHLLTKGGTVVLIHVKHKPSSFSTSASLSTPRAGIHGIAEHSLVCHDPDEHTKEIFRPYRVFCARKDIHCKDVVLEEVDVSKALIEYVTQSSIEHLVIGSSHKTGFLRFKVADIPGNVAKGAPDFCTVYVVAKGKIQTMRSASRPAPSFTPLQTQINQASTKSTQSDPRVHLTNSVKGLERRSVDAPVKLQDGTESFRSPFNRKGMHDKSYGEISLSDTDITFVSSGRSSTDRMFPSIHIHSDTSMSNPRLSYSSDIDPNHSFESMHCGRTSMDINSSEFSSFSHDSDGLSSSNSSSMDEVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKIEEERRLEEARLAEEAAMAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRINAEMKALREAEEKRKAVDALSNRDVRYRRYAIEEIEAATNFFTESLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDRLFCRGNTPPIPWQFRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVAENVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGVILLQILTARPPMGLTHHVDRAIEKGTFIDMLDQNLQDWPVEDALSLAKMAIRCAELRRKDRPDLGKEVLPELERLKALAENSDQHMMLGGYISPSNHSQVSLHLDGSCSPLPYSGESSRNPSSP* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2151 783 Gene3D Phosphorylase Kinase; domain 1 446 540 - -
Lja5g2151 783 Coils Coil 380 440 - -
Lja5g2151 783 Pfam Protein kinase domain 469 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2151 783 SUPERFAMILY Protein kinase-like (PK-like) 451 723 IPR011009 -
Lja5g2151 783 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 11 781 - -
Lja5g2151 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Lja5g2151 783 Pfam Universal stress protein family 18 166 IPR006016 -
Lja5g2151 783 MobiDBLite consensus disorder prediction 315 336 - -
Lja5g2151 783 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 167 - -
Lja5g2151 783 SMART serkin_6 468 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2151 783 CDD STKc_IRAK 474 734 - -
Lja5g2151 783 Gene3D Transferase(Phosphotransferase) domain 1 541 749 - -
Lja5g2151 783 Gene3D HUPs 17 169 IPR014729 -
Lja5g2151 783 MobiDBLite consensus disorder prediction 762 783 - -
Lja5g2151 783 CDD STK_N 17 170 - -
Lja5g2151 783 ProSiteProfiles Protein kinase domain profile. 468 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2151 783 PANTHER OS02G0152300 PROTEIN 11 781 - -
Lja5g2151 783 Coils Coil 334 354 - -
Lja5g2151 783 MobiDBLite consensus disorder prediction 315 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2151 Lja-Chr5 30946165 30959813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2151 1 761 Receptor kinase-like Gene Family AT1G78940 55.000 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lja5g2151 Pkinase 3.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2151 - - gmx:100779981 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2151 5 30946165 30959813 Lja5g2151 5 30946165 30959813 ECH