Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2137 ATGGAGATTGTGGAGCCTAACACGTGCATTCGGGGTTGCTGCACCAGCTCCTCTATCCCTCTGCATCTCCCTCCTTCCTCCTATACTCTTCTTTCACCTATTGCCCGAGGGGCTGAGAGTGCTGTTTATGAAGGGATTTTGGATGGCAAGAAGGTTGCTGTGAAGAAACCCATCTTGTCTGTTTCTGAAGACATTAACAAGTTTCATAAAGAATTGCAATTGCTATGCAAGCTAGATCACTCGGGAATAGCAACACTTATTGCCGCGCATGCAAAACCACCCAATTACATGTTTTTCTTCAAGTTATATGAATCATCAAATCTCTCACAGAAGTTACATGTAGAAGAATGGGCCCCGACTATCAATCATGCGCTTGTGATAGCAATGCAGTTAGCAAAGGCTTTGCAATATCTGCATAACCTCGGGATTGTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACAAAAATCTTTGTCCACATCTCACAGATTTTGGTTTGGCTGAGTACAAGAATGATATTAAGAGAGTTTCTCTTGAGAATTGGAAGTCTTCTGGAAAACCTACTGGTGGTTTTCACAAAAAGAATATGGTTGGAACACTCGTTTACATGGCACCTGAGATATTAAGAAAGGAGTTACACACCGATAAGTCAGATGTATACAGTTTTGGGGTATCAATCAATGAACTCCTTACTGGTGTTGTGCCATATACCGATCTTCGTGCAGAAGCACAGGCCCACACAGTGCTTGAGATGAACTATACTGAGCAGCAACTAATAGAAGCTGTTGTTTCTGATGGATTACGGCCAGTCCTTGCCAGTAAGGATTTTGGTATACCATCAAGATTATTATCTATGATACAGAAGTGTTGGGATACAAATCCTAAAAGTAGACCTTCCATTGATGATATTGTCAAGGAACTTGATTTTATCATTGAGCACAGGAGGAAAAAGAAGGTAGAAGATATGCACATCAGAGCTTGTAACCTGCATGTCGATAAACTGGTGGAGGAAACTCACCTTCAGGCTTATCAAGAGACTATTAGCTGGTCGACTCAAGGTGAACTTTTGGCCAGTGCATCCCGTGACACTGATTCTGGTTTGAGCACATGGCTTGAGTCTTACGGTGAGCCTTTGGCATACATTCCAAGACTCTCATGGGGATCTTATGCTACCTGTGGGAGAAGGGAGACTATGGAGGACACACATTTCATTCTGCCCCATATTTGCAATGAAAATGATGTCTATGCTTTTGGTATCTTTGATGGCCACAGAGGTGCAGCAGCTGCTGAGTTTTCTTCTAGAGCTGTACCAGCAGTTTTACAAACTTTAGGTTTTAAGAGGAGCCCTGCTGATGCGCTAGTGGAAGCATTCCTTAGGACAGATGCTGCCTTCATAAAAGAGCTTGATTCTTTTCGCAAATCCAACAGATATATTCAGAAGGATTGGCATCCTGGTTGTACTGCAATTACTGCTCTAGTAGTTAGGAACAGGCTATTTGTTGCTCACATTGGTGATTGCAGGGCAATCTTATGTCGTGCTGGTAATCCCATTGCTCTAACTGAGGATCATGTCGCTAGCCGTCTTCAAGAGAGAGAGCGTGTTATTCGTTATGGGGGCCATGTACATTGGCAAGTTGATACCTGGAGAGTTGGTCTTCCTGCACTTCAGGTTACACGTTCTATTGGCGACGATGACCTGAAGCCTGCTGTAATTGCAGAACCTGAGGTAACAGAGAGCAACTTAAGTGCAGAGGATGAATTTCTGGTTATGGCTAGCGATGGCCTCTGGGATGTTATGAGCAGTATGGAGGTGATAGATATAATAAACAAGACTGTTAAAGAGCCTGGAATGTGTTCTAAGAGGTTGGCTACTGAAGCAGTAGAACGTGGCAGCAAAGATAATATTACAGTTATTGTCGTTTTCTTACGTCCAGTATCTACAGCAGAGAGAATTTATTAG 1965 0.428 MEIVEPNTCIRGCCTSSSIPLHLPPSSYTLLSPIARGAESAVYEGILDGKKVAVKKPILSVSEDINKFHKELQLLCKLDHSGIATLIAAHAKPPNYMFFFKLYESSNLSQKLHVEEWAPTINHALVIAMQLAKALQYLHNLGIVHRDVKPANILLDKNLCPHLTDFGLAEYKNDIKRVSLENWKSSGKPTGGFHKKNMVGTLVYMAPEILRKELHTDKSDVYSFGVSINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLIEAVVSDGLRPVLASKDFGIPSRLLSMIQKCWDTNPKSRPSIDDIVKELDFIIEHRRKKKVEDMHIRACNLHVDKLVEETHLQAYQETISWSTQGELLASASRDTDSGLSTWLESYGEPLAYIPRLSWGSYATCGRRETMEDTHFILPHICNENDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTLGFKRSPADALVEAFLRTDAAFIKELDSFRKSNRYIQKDWHPGCTAITALVVRNRLFVAHIGDCRAILCRAGNPIALTEDHVASRLQERERVIRYGGHVHWQVDTWRVGLPALQVTRSIGDDDLKPAVIAEPEVTESNLSAEDEFLVMASDGLWDVMSSMEVIDIINKTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2137 654 ProSiteProfiles PPM-type phosphatase domain profile. 387 644 IPR001932 -
Lja5g2137 654 Pfam Protein phosphatase 2C 392 637 IPR001932 -
Lja5g2137 654 Gene3D Transferase(Phosphotransferase) domain 1 18 345 - -
Lja5g2137 654 SMART PP2C_SIG_2 402 644 IPR001932 -
Lja5g2137 654 SMART PP2C_4 377 642 IPR001932 -
Lja5g2137 654 PANTHER PROTEIN PHOSPHATASE 2C 1 654 IPR015655 GO:0004722|GO:0006470
Lja5g2137 654 SMART serkin_6 28 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2137 654 CDD PP2Cc 389 644 IPR001932 -
Lja5g2137 654 SUPERFAMILY PP2C-like 372 646 IPR036457 -
Lja5g2137 654 SUPERFAMILY Protein kinase-like (PK-like) 15 317 IPR011009 -
Lja5g2137 654 PANTHER - 1 654 - -
Lja5g2137 654 ProSiteProfiles Protein kinase domain profile. 28 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2137 654 Gene3D - 383 649 IPR036457 -
Lja5g2137 654 Pfam Protein kinase domain 28 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2137 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2137 Lja-Chr5 30415131 30442134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2137 97 654 PP2C-type Phosphatase Gene Family AT2G40860 63.280 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Lja5g2137 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2137 - - gmx:100785390 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2137 5 30415131 30442134 Lja5g2137 5 30415131 30442134 ECH