Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2106 ATGAGGCGCCGCTCTGACCAAATGGAAAGATCAGCAAAGAACCAGATTTCCCGGGTATGCTGTTTAGCATCATTGTCTGCATTCTTCTGGTTCTTTCTCTTGTACTTCCATTTTGTTATCCTTAGAGGAGGACATAATAATACCAATACTAATACTAATACTAATCATTATGTTGAGAGTGAGACCAAATCAACACCTGTTTATGTAACTGATGATCCTCAAGTTCAAGCCCCTCCTACAAAGATTGGCTTCACTGATTCTGAACCCGAGGTTCGAAAGAGTGATACTGAGAGTGAGAGTGAGAGTGAGACTACTGGCCATGATGAGAAGAATTACCCTTTTATGAAAGCAATGAGAGCTGCTGAAAATAAGAGTGATCCATGTGGGGGGAGGTATATTTATGTGCATGATCTTCCGTCGAGGTTTAACGAGGACATGTTGAAGGAGTGTAAGAGTTTGAGTCTTTGGACTAACATGTGTAAGTTCACAACCAATGCTGGCCTTGGGCCGCCGCTTGAGAATGATGAAGGGGTGTTCTCTGATACTGGCTGGTATGCCACGAATCAGTTTGCTGTTGATGTGATATTCAGTAACCGGATGAAGCAGTATGAGTGCTTGACGAATGATTCGTCTGTTGCTGCTGCGGTTTTCGTTCCCTTTTATGCGGGGTTTGATATTGCGCGTTTCCTTTGGGGGTATAATATTTCTGTGAGGGATGCGGCTTCGGTTGATCTGGTTGACTGGCTTATGAAGAGGCCAGAGTGGAGCATCATGAATGGGAGAGATCATTTTCTTGTTGCGGGAAGGATAACGTGGGATTTCCGGAGATTATCTGAGGAAGAGTCAGACTGGGGAAATAAGCTTCTGTTTTTACCGGCAGCGAAGAATATGTCGATGCTTGTGGTCGAGTCCAGCCCCTGGAATGCAAATGATTTTGGGATTCCATATCCTACATACTTCCACCCTGCAAATGATGCCGATGTATTCAGTTGGCAGGACAGAATGAGACGGTTAGAGAGGAAGTGGCTTTTCTCTTTTGCTGGAGCTCCCAGACCTGACAACCCAAAATCAATCAGGGGTCAATTAATTAACCAATGCAAATCGTCACGCGTTGGTAAGCTGTTGGAATGTGACTTTGGTGAAAGCAAATGTCATTCTCCCAGCAGCATAATGCAGATGTTTCAAAGCTCGCTTTTCTGCCTGCAACCCCAGGGTGATTCATACACCAGAAGATCTGCATTTGATTCAATGTTAGCTGGTTGCATACCTGTCTTCTTCCATCCTGGTTCAGCATATACACAATATTTTTGGCATCTCCCCAAGAATTATACCAAGTATTCTGTCTTCATCCCAGAGGATGATATTCGGAAGAGGAATGTCAGTGTAGAGGAAAGGCTTAGTCAGATACCTCCTGAGCAAGTGAAAATTATGAGAGAAGAGGTCATTAGTCTTATTCCAAGACTGGTATATGCCGACCCTCGCTCCAAGTTAGAAACTCTTAAAGATGCATTTGATGTTGCTGTTCAAGCTATAATTGACAAGGTTGCAAATTTGAGGAAGGATATTATTGAAGGCCATATTGATGAGAACTTTATTGAGGAGAACAGTTGGAAATATGCTTTGTTGGATGAGGGACAGCATGAGGTCGGAGCTCACGAATGGGATCCTTTCTTCTCAAAACCAAAGGATGGTAGTGGTTGA 1701 0.4356 MRRRSDQMERSAKNQISRVCCLASLSAFFWFFLLYFHFVILRGGHNNTNTNTNTNHYVESETKSTPVYVTDDPQVQAPPTKIGFTDSEPEVRKSDTESESESETTGHDEKNYPFMKAMRAAENKSDPCGGRYIYVHDLPSRFNEDMLKECKSLSLWTNMCKFTTNAGLGPPLENDEGVFSDTGWYATNQFAVDVIFSNRMKQYECLTNDSSVAAAVFVPFYAGFDIARFLWGYNISVRDAASVDLVDWLMKRPEWSIMNGRDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPANDADVFSWQDRMRRLERKWLFSFAGAPRPDNPKSIRGQLINQCKSSRVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYFWHLPKNYTKYSVFIPEDDIRKRNVSVEERLSQIPPEQVKIMREEVISLIPRLVYADPRSKLETLKDAFDVAVQAIIDKVANLRKDIIEGHIDENFIEENSWKYALLDEGQHEVGAHEWDPFFSKPKDGSG* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2106 566 Pfam Exostosin family 128 465 IPR040911 -
Lja5g2106 566 MobiDBLite consensus disorder prediction 86 111 - -
Lja5g2106 566 PANTHER BNAA09G10260D PROTEIN 11 536 - -
Lja5g2106 566 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 11 536 IPR004263 GO:0006486|GO:0016757
Lja5g2106 566 MobiDBLite consensus disorder prediction 49 111 - -
Lja5g2106 566 MobiDBLite consensus disorder prediction 49 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2106 Lja-Chr5 28686739 28689217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2106 K20888 - gmx:100780467 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2106 5 28686739 28689217 Lja5g2106 5 28686739 28689217 ECH
Lja1g0978 1 9719077 9726765 Lja5g2106 5 28686739 28689217 PCT