Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2095 ATGCCAACGCCGATCACCTTCCTCCTCGCTCTCCTTCACTTGCTGCTTTTCTCTTGCTGCTCAGCGGAGCTGGGTTATACTGGTCTGTCTTTTGCTTCATCTGAACAAGCTAAAGCGTGGTTAAGTAAACCTTATTCTGGGCCATATTCTGCTCCTGTGCCAGCTCCATCTTATCAAGGGCCCAGTGCGACTTTAAGATTGAAACATCCTCACCATCACCACAGTGTGAAACCTTATGCTGTGGCTCCATCCCGTTCTGAAGACCAAGCTTGTGGTCAAACCTGTACGGATCCGTTCACAGCAACTCCCTTTGGTTCACCTTGTGGTTGTGTATATCCCATGAAAGTCAGACTTATACTGGATGCAGCTCTTCTGGTTGTTTTATCAGTAATTGGTGACTTCGAGATTGAAGTTGCATCTGGAACATATTTGAAGCAAAGCCAGGTGAGGATAATGGGTGTCAATGCTGACATTCAAAATCAGGGAAGAACCATTGTTGATATTAATTTGGTTCCACTTGGAGATAGATTTGACAATATCACTGCAGTTCTGACATATAAGAGATTTTGGCACAAGAAAGTTCCTCTAAATCGGAGTCTTTTTGGTGATTACACAGTCTTGAACATTACTTATCCAGGTATGCCATCACCGACGCCACATGGAACCTTACCTGGGAGGGGTCCTGATCCCGGTGAAAATACTGATGGTTTTCTCCCAGTCACTGCCGACGTTATGAGCAAGAGCGAGAAAATGAATCTTAGAACCATAATCTTCATTGCTTCATCTTGCATTTTACTCTTGCTGGTTTTGGTTGGAGCACTTATCATCATTTTTAAATGGAGGAAAACTAAGAGACCATCAAGTGCTGTTGACCCTCCATTCACATCATCTGTAAACAAGAGATCTGCCATGGAGTCTATGCTGTCAAGCAGAATTACAAGCTCAAGATCAATGTCTGTAGTGTCCACCATGGCTACTTCTATTCGCTCTGTTAAAACGTTTTCCTTTTCTGAGCTTGAGAAAGCAACTGATAAGTTCAGTTCACAAAGAGTATTAGGAGAAGGAGGATTTGGGCGTGTTTATTGCGGTACATTGGATGATGGAACTGATGTTGCAGTTAAACTTCTAACAAGGGCTAAGCAGAATGGAGACAATGAATTCATTGTGGAAGTTGAGATGCTATGCCGTTTGCATCATCGAAATCTTGTGAAACTCATTGGTATATGCAGAGAAGGGCGCAGGCGTTGTTTGGTGTACGAGCTTGTTCGCAATGGCAATGTTGAGTCTCATTTGCATGGTGTTGACAAGGAAAGCAGCCCTCTTGATTGGGATGCTCGGATGAAAATTGCCCTTGGAGCTGCAAGAGGATTGGCCTACCTTCACGAGGATTCTAATCCCCGTGTAATTCACCGAGACTTTAAAGCTAGCAATGTGTTGTTAGAAGAAAACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGGGAAGCAACCGAAGGAAATCACCATGTTTCTACAAGGGTCATGGGTACATTTGGATATGTTGCCCCAGAATATGCAATGACGGGCCATTTACTCGTCAAAAGTGACGTTTATAGTTATGGTGTCGTACTGCTCGAGCTTCTAACAGGCAGAAAACCTGTGGACATGTCTCAATCTCCCGGACAGGAGAATCTTGTAACATGGGCGCGCCCACTATTGACAAGTAGAGAGGGTTTAGAACAGCTGGTGGATCCATCTTTGGCCGGAAGCTATGACTTTGATGACATGGCAAAGGTGGCTGCTATTGCTTCAATGTGTGTGCACCCGGAGGTTGATCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATATGCAATGACAAAGATGAGGCCTGTAGTTTGAAGGAGTCTTCTGCTCCGGAGTCGGATTTTGGAGGTGACCTTGCATTTTCTGATAGCAGTAGGTGGAATGCTGAAGGGGTTACCCCTCGATTCATCACAATGGAATACAGTTCTGGTCGACTTGAAGGTGAAAACAGGCCGTTTTCAGCTTCAAGCTTGATTGAAGATGAGATATCTTTGCCAATTAGGCATGGGAATAGATCAGGTCCCTTGAGACCTGCCCGGAGCAAGCTATCCTTGTATAGATTTTCTGGAAGTAGGAGTGAACATGGAGTACTTCCTTCCAAGCGTGTTTGGAATGATGGTTACTGGCCTTAA 2211 0.4446 MPTPITFLLALLHLLLFSCCSAELGYTGLSFASSEQAKAWLSKPYSGPYSAPVPAPSYQGPSATLRLKHPHHHHSVKPYAVAPSRSEDQACGQTCTDPFTATPFGSPCGCVYPMKVRLILDAALLVVLSVIGDFEIEVASGTYLKQSQVRIMGVNADIQNQGRTIVDINLVPLGDRFDNITAVLTYKRFWHKKVPLNRSLFGDYTVLNITYPGMPSPTPHGTLPGRGPDPGENTDGFLPVTADVMSKSEKMNLRTIIFIASSCILLLLVLVGALIIIFKWRKTKRPSSAVDPPFTSSVNKRSAMESMLSSRITSSRSMSVVSTMATSIRSVKTFSFSELEKATDKFSSQRVLGEGGFGRVYCGTLDDGTDVAVKLLTRAKQNGDNEFIVEVEMLCRLHHRNLVKLIGICREGRRRCLVYELVRNGNVESHLHGVDKESSPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEENFTPKVSDFGLAREATEGNHHVSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQSPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVDQRPFMGEVVQALKLICNDKDEACSLKESSAPESDFGGDLAFSDSSRWNAEGVTPRFITMEYSSGRLEGENRPFSASSLIEDEISLPIRHGNRSGPLRPARSKLSLYRFSGSRSEHGVLPSKRVWNDGYWP* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2095 736 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g2095 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lja5g2095 736 CDD STKc_IRAK 352 621 - -
Lja5g2095 736 PANTHER OS01G0750732 PROTEIN 9 732 - -
Lja5g2095 736 Gene3D Transferase(Phosphotransferase) domain 1 422 639 - -
Lja5g2095 736 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 9 732 - -
Lja5g2095 736 Pfam Protein tyrosine and serine/threonine kinase 348 618 IPR001245 GO:0004672|GO:0006468
Lja5g2095 736 Gene3D Phosphorylase Kinase; domain 1 317 421 - -
Lja5g2095 736 SUPERFAMILY Protein kinase-like (PK-like) 325 619 IPR011009 -
Lja5g2095 736 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2095 Lja-Chr5 28473015 28479085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2095 91 723 Receptor kinase-like Gene Family AT5G56890 54.338 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lja5g2095 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2095 - - lja:Lj0g3v0221179.1 1444.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2095 5 28473015 28479085 Lja5g2095 5 28473015 28479085 ECH
Lja1g0965 1 9566749 9571572 Lja5g2095 5 28473015 28479085 PCT