Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2087 ATGGATCTTGATCACCTTGGATGTTACAATGTAACTATTCTTAATCCCAATCGAATATGGCAAACTGGTAATGTTCTAAAATCGGAGCTGCCTATTATCGCAGTTCAAGTTGTCTGGAGTGCAATGATGTCTCGTCTTTTCTTCTTTGCTTATAAACCCTTGAAGGTGGGTATCCTACTAACTTACCCATTCTTAGGGAAGTTTGAGTTTATACACAGGTTCATTTTTCCAGTAGAAGGTGTCCTTAACATCGAAGTGTTGGCACACTTTGGTTTGATATATTATGCCTTTCTCACCGGGCTAGAAATGAACTTGAACACCATTCTTCACGCGAAAAAAAGGCGACTCTATAAATCTGACCCTCATGAACGCTTGACCATAATGGAGGAAAGTACAATAAGCGGTTATTTGATCTGGACTCTAGTTCTCACCGTGACAGGTTTCCCGGTGGTGGCTCACACGCTTTCCGAGCTCAAGCTCCTATACACCGGTCTTGGTAAGAACGCTGTAACCACCGCAATGATCAGCGATACCTACAGCTGGATTCTGTTCATGCTGTTGATTCCATTCTCGACCATTGGTGAGAAGGCAGTGTACTCCGTCGCGAGCACCACAATCTTCATCTTAGTCTGCATCTTTTTAGTACGTCCAATCCTTGTGCGGATTATCGATCGTAAGACGGAGAATGGCGATTGGGATGATGATGAATTAGTGTATGTGGTGATGGGGGTTTTGGTTTGTTCGTTAATTACTGACGTTCTAGGAACACATTCAGTTGTTGGGGATTTTGTGTACGGATTGATTTTACCTCATGGGAGGTTCGCCGACTATCTGATATTATTTTCAGATGATTTTGTCGGTGGATTTTTTGGGCCTCTCTACTTCATTGGAAGCGGAATGAGGCTGACATTCACATCAATGTTCTTCCAGGGGCATTGGCCCTTTACAGTGTTGATTGTGCTCTTGTTGTGTACCCTCAAGATTGTTAGCACTTTGCTTACAACTTTCTTCTTTGGCATGCGTGTTCAAGATGGTTTGTCCTTAGGCTTGATTCTCAATTCCAAAGGTGCTATGGCATTGATCATGCTCAGCATGGCTTGGGACAGAACGATTTTTACGATACCGACCTATGCTGTGGCTACTTCAGCTGTAGTTCTAATGACCATGGTAGTTGCGCCCATCATCAACATCGTCTACAAGCCAAGAAAGAGATTTGAGCAGAACAAGATAAAGACCATACAAAAGCTAAGAGTTGATGCAGAGCTTCGAATCCTAGCATGTGTCCACAACAATCGCCATGCTACAGGAATGATAAGCCTCATCGAATCCTTCAACCCGACGAGACTCTCCCCAATGCACGTCTTCGCTCTTTTCCTCATTGAACTTACCGGACGCGGAGCAGCCCTTGTTGCCGCCCACATGGCACAACCTATCAGCCAGGTCGGAGAACAAAACCTGACCAAATCTCAAGCAGAGTTTGAAAGCGTCAACCACACCTTCCAATCATTAGCTGAGGCCTACAATGCTGTGAGAGTCCAAGCCTGGAACGTGGTGTCAGCCTACGCAACCATTCACGAGGACATATACAATGCGTCCAATGAGAAACGTACGAGCTTAATTCTCCTTCCGTTCTACAAACACTTAACCTCGGAAGCGTCACTTGAAACCACAAGTGTCGCGTACAAAGACATCAATCAAAACGTGATACAAGGCGCACCTTGTTCCGTTGAAATATTCGTGGATCGCGACTTCGGGTTGTTGCCCAAAAGCGACATTCGTATTCTCATGCTGTTTGTTGGAGGGTCGGACGACCGTGAAGCCTTGGCCGTTGCATGGAGGATGGCCGGGCATCCGGGAATCCAACTATCAGTTGTTCGAGTTCTCTTGTTGGATGAAGCTGCAGAGGTGGATACTACACATCACAGTGAAGCACAGGGAATACTGAATGTTGTAATGGATAGTGAGAAGCAAAAGGAGTTGGATGATGAGTACGTGAGTGCGTTTCGGCTCACCGCGGTGAACAATGACGACTATATCTCGTACTCGGAGGTTGATATCCATAATGGTGAGGAAATACCTATGGTACTGAATAAGCTAGACAAGCTTTCTTGTGACTTGTACATAGTGGGACAAGGAAATTGTAGGAGTTCTCGTGTTTTTTCAAGTTTGTTGGAATGGTGTGATTGCTTTGAGCTTGGAGTGATAGGGGATATTTTGGCGTCTAACAATTTTGGGTCGAGGGCTTCTGTGCTGGTTGTGCAACAATATGGGTATGGAGGAATGGTTTTGGAAAAGAATTTAAAACATGCGACTACTAATATTGATGACTTTGAGACTCTTGTTGTGAAGGCGGAATGA 2358 0.4483 MDLDHLGCYNVTILNPNRIWQTGNVLKSELPIIAVQVVWSAMMSRLFFFAYKPLKVGILLTYPFLGKFEFIHRFIFPVEGVLNIEVLAHFGLIYYAFLTGLEMNLNTILHAKKRRLYKSDPHERLTIMEESTISGYLIWTLVLTVTGFPVVAHTLSELKLLYTGLGKNAVTTAMISDTYSWILFMLLIPFSTIGEKAVYSVASTTIFILVCIFLVRPILVRIIDRKTENGDWDDDELVYVVMGVLVCSLITDVLGTHSVVGDFVYGLILPHGRFADYLILFSDDFVGGFFGPLYFIGSGMRLTFTSMFFQGHWPFTVLIVLLLCTLKIVSTLLTTFFFGMRVQDGLSLGLILNSKGAMALIMLSMAWDRTIFTIPTYAVATSAVVLMTMVVAPIINIVYKPRKRFEQNKIKTIQKLRVDAELRILACVHNNRHATGMISLIESFNPTRLSPMHVFALFLIELTGRGAALVAAHMAQPISQVGEQNLTKSQAEFESVNHTFQSLAEAYNAVRVQAWNVVSAYATIHEDIYNASNEKRTSLILLPFYKHLTSEASLETTSVAYKDINQNVIQGAPCSVEIFVDRDFGLLPKSDIRILMLFVGGSDDREALAVAWRMAGHPGIQLSVVRVLLLDEAAEVDTTHHSEAQGILNVVMDSEKQKELDDEYVSAFRLTAVNNDDYISYSEVDIHNGEEIPMVLNKLDKLSCDLYIVGQGNCRSSRVFSSLLEWCDCFELGVIGDILASNNFGSRASVLVVQQYGYGGMVLEKNLKHATTNIDDFETLVVKAE* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2087 785 Gene3D - 124 409 IPR038770 -
Lja5g2087 785 PANTHER CATION/H + ANTIPORTER 19 114 - -
Lja5g2087 785 Pfam Sodium/hydrogen exchanger family 132 394 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja5g2087 785 Coils Coil 774 785 - -
Lja5g2087 785 PANTHER CATION/H+ EXCHANGER 3 123 770 - -
Lja5g2087 785 PANTHER CATION/H + ANTIPORTER 123 770 - -
Lja5g2087 785 PANTHER CATION/H+ EXCHANGER 3 19 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2087 Lja-Chr5 28059677 28073376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2087 8 781 Antiporter Super Family AT2G13620 34.858 8.12e-162 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2087 - - gmx:100804266 1097.03