Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2084 ATGGAGAGGAAGAGAAATTTTTCAGATGTTTCAATTTCTAGGATCAGAAGCTATCTTTTGGTACTACCATTTGTGTTGGCTTTTGTCACTCCAACTCTTTTAAGTGCTTCAGAAATTTCTACAATTAAAGAGGATCACGTGTTCCCTATGTTCATAAAGTGGCACATATACATTGTCAATAGGTTGAGCAACAACCATAACTTGTTCACCCATTGCAAATCCGCAGAAAATGATTTGGGTGACCACGACCTATCTCCAGGCTCCAACACCACTTGGAGTTTCAGGACTGAATTCTTCCAAGGAACGTTGTTCTGGTGCCATGTGAGCAAAGACGATGCTTCTGCTACATTCAATGTTTTCTGGAATGATGCTCGTCTTTTTGACAAGTGTGGTTGGAAGAAATGCATATGGGTTGTTAAAGATGATGGAGTTTACCTAACACATTTGAGTACAAACTGTGATGAACTGCGTTATAAGTGGGGTGATAGAATGTGA 495 0.398 MERKRNFSDVSISRIRSYLLVLPFVLAFVTPTLLSASEISTIKEDHVFPMFIKWHIYIVNRLSNNHNLFTHCKSAENDLGDHDLSPGSNTTWSFRTEFFQGTLFWCHVSKDDASATFNVFWNDARLFDKCGWKKCIWVVKDDGVYLTHLSTNCDELRYKWGDRM* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2084 164 Pfam Plant self-incompatibility protein S1 55 160 IPR010264 -
Lja5g2084 164 PANTHER - 38 162 IPR010264 -
Lja5g2084 164 PANTHER - 38 162 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2084 56 160 Carbohydrate Esterase AT3G16970 32.407 1.06e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2084 - - lja:Lj0g3v0308189.1 261.536