Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2080 ATGCTCATAGACCAAGAAATGTCCAAAGAAAAAAATTCCAAGCACAACTCACCAAATGTAATTGCCCAATTAATGGGGCTAGAAAGCCTTCCAAAGGTGAGAAGCCATGAAAAAGATTACTCTGAACATGTGTATGGTCAACTAGGATCTCCATTGAAACATTGGCACCTGGAAAATAGGTTCATGGATAAGGAAATGCTTCATGAAGTTCATCCAAGCACAGAACAGATTGCTTGCAAAAATGACTATGAAAGAGGTAGGTGGAGTGAAGATGTTGTTGTTGATAAGGAAAAAATGGCTCTCATTTGTCAGAAATTCATGGAAGCAAAAAGGCTTTCAACAGATGAGAGACTGCGCCAGTCGAAGCAATTCGAGGATGCCTTGGAAGTTTTAAGCTCCAACAGTGATCTCTTAATCAGGTTATTGGATTCACAAAATCTTCATTGTAGTCCAACAGATGAGAGAAATCCCATTACTCTTATTAAACCTTTGAAGATGTTTGACAATGACAAATCGGTCAAAAAGGGGAAGAAGAATTCTAGAATGATTAAGAAACAAGCAAATTCTGATCAAGCAATTGTATGGGAGAATATGAATCATGGATACTCTCCAGTCAGTCAGAAAGTTGATGAGTTTCCAGTTCAATCTACTCGAATCGTGATATTGAAGCCTAGCCCAGGAAGAACACCTGAGCTTAAGGCTTTCAATTCTCCAACAACTTCATCACCTCAAAATCTGCAAAGTGGGAATTTCTATCAGGGATTCGGAGATGAAGATGATGTGCTGGAATCCAAAAAATTGGCAAAAAAAAATCCAAACGAAATGCATGAAGGCTTGAGAAACTATCAAAAGGATAAAATTTTACATTCTTCAGTCTTTGAGAGTTCATTTAACAAACCACATCATGAGTACACACCTGGGAATTACATTGATTTGGAAGCCATGTCACCATTGGCAAGGCATTCATGGGAATACAACAACATCAATTGCTGGGGAAGTCCTTACTCTACAATGTCCTTAGGTCGCGCATCATGTTCTCCTGAGTCATCAGTGTGCATGGAAGCAAAGAAAAGACTTTCTGAAAGGTGGAACATGATGGCCTCCAACAATAAAGGTTCTCAAGAACAAAGGCATGTGCAGCAACACTCTACCTTGGGGGAAATGCTTTCTCTTTCGCGTATAAAGAAATCCGTGACGTCTGAGTTCAAGAGCGTTAATGAAGACCAGGAAGAAGCAAGAAAATCTGTTTCTTGCAGGCTTTCTTTCAATGAAGATGTAAGCACTCAGGGTTCTCCTAAAAATGTTCCAAGGTCAAATTCTCTCCCTGCATCTTCTAGTGCCTATGAAACTGGGGTTAGCAAATCACAAGGGTCCAAGGTGCTGAAAAAGTCGAAGAGTATTGGATCATCGTTTAAAGGGAAAGTTACTAGTTTGTTTTCAAGGAATAAGAAATCAACCAAGAAAAAATCTAGTACATCTCAGTGTAAAGATGAAACCCAATCTCCTGTCACTGAAAGATCAGGTTTTCCAGCATCATCTGGAGTGCTTACAGATGATGAGTCTCAAAGCTTCAGCTTTCGCGGCTTGGAAGAGTGTTCTCTTTCAGCTCTATTTGAATCACCAAGAAGAACTTCAACAGTTTCTGTCTCAAACGGACAACAGCAAGAGATGATTGCACTTGAGCCTGGATTGACTGAATCAAAGCCAATGGTGCCAGAGATATCAAGTGAAAACCAGGATCAGCCAAGTCCAATCTCAGTGTTAGAAACTCCATTTAAAGATTATACAGTTAATGACTCTATGAAGGGTGATCACCAGGGATCTGAGGTTCCACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAGTATCTAGGACCCTGTCATGGCATGATTCTTGTGAAGACGTAGCAAGTTCTTATTCTGTAAAATCCTCTTCATTAGACACCAAGGTAGAGGGGCAGGAGTGGATTCTATTGGTCCAGAAACTACTATCAGCAGCAGGACTTGATGATCAAGAAAATTGCAACTCATTTCACACTAGATGGCATTCCACTGAAAGCCCATTGGATCCTTCACTGAGGGACACATATGCCAACATGAATGACAACAAGGACCCTTGGACTCTCCATGAGGCCAGGAGAAGGAAGATGAGATCAAATCAGAAGCTTGTGTTTGACTTTGTCAATGCTGCACTGTTAGAAATTGGTTATGATGGACCAGAGAATCACTTAAAGAGGAGAATGTACAGTGGGAGCCACTTCAGGCCCCTAGTAGTGAAGCAAGAGTGTGGTGGATCTCCTCCCATTTTGGTGGACCACATTGTGGGCCAAATGAAGGAGTTAATGTGGGAGGATTGTGGGGACAACCACAGCCTGGTGGTAGAGAGTGTTGTTAGGAAAGAAGCTGTGAAGGTGGGGTGGGTTGAGCTTATGAGGTTGGAGATTGATGTTTTGGGGAGTGAGATAGAGGGGAAGTTGATACAAGAGCTTGTGGAAAATGCTGTGGTTGATTTAACAGGAAGAGCCTGA 2538 0.4133 MLIDQEMSKEKNSKHNSPNVIAQLMGLESLPKVRSHEKDYSEHVYGQLGSPLKHWHLENRFMDKEMLHEVHPSTEQIACKNDYERGRWSEDVVVDKEKMALICQKFMEAKRLSTDERLRQSKQFEDALEVLSSNSDLLIRLLDSQNLHCSPTDERNPITLIKPLKMFDNDKSVKKGKKNSRMIKKQANSDQAIVWENMNHGYSPVSQKVDEFPVQSTRIVILKPSPGRTPELKAFNSPTTSSPQNLQSGNFYQGFGDEDDVLESKKLAKKNPNEMHEGLRNYQKDKILHSSVFESSFNKPHHEYTPGNYIDLEAMSPLARHSWEYNNINCWGSPYSTMSLGRASCSPESSVCMEAKKRLSERWNMMASNNKGSQEQRHVQQHSTLGEMLSLSRIKKSVTSEFKSVNEDQEEARKSVSCRLSFNEDVSTQGSPKNVPRSNSLPASSSAYETGVSKSQGSKVLKKSKSIGSSFKGKVTSLFSRNKKSTKKKSSTSQCKDETQSPVTERSGFPASSGVLTDDESQSFSFRGLEECSLSALFESPRRTSTVSVSNGQQQEMIALEPGLTESKPMVPEISSENQDQPSPISVLETPFKDYTVNDSMKGDHQGSEVPLKSNLIDKSPPIESVSRTLSWHDSCEDVASSYSVKSSSLDTKVEGQEWILLVQKLLSAAGLDDQENCNSFHTRWHSTESPLDPSLRDTYANMNDNKDPWTLHEARRRKMRSNQKLVFDFVNAALLEIGYDGPENHLKRRMYSGSHFRPLVVKQECGGSPPILVDHIVGQMKELMWEDCGDNHSLVVESVVRKEAVKVGWVELMRLEIDVLGSEIEGKLIQELVENAVVDLTGRA* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2080 845 Pfam Domain of unknown function (DUF4378) 663 835 IPR025486 -
Lja5g2080 845 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 844 - -
Lja5g2080 845 MobiDBLite consensus disorder prediction 481 517 - -
Lja5g2080 845 Pfam DUF761-associated sequence motif 13 34 IPR032795 -
Lja5g2080 845 PANTHER DUF3741 FAMILY PROTEIN 1 844 - -
Lja5g2080 845 MobiDBLite consensus disorder prediction 495 517 - -
Lja5g2080 845 MobiDBLite consensus disorder prediction 369 390 - -
Lja5g2080 845 MobiDBLite consensus disorder prediction 424 463 - -
Lja5g2080 845 Pfam Protein of unknown function (DUF3741) 103 146 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2080 Lja-Chr5 27880040 27885108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2080 2 842 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 37.307 1.28e-132 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2080 - - gmx:100787955 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2080 5 27880040 27885108 Lja5g2080 5 27880040 27885108 ECH